Information for 17-CTTTTACTCCTTC (Motif 30)

A G T C A C G T A G C T A C G T A C G T C G T A A G T C A C G T A G T C A G T C C A G T A C G T A G T C
Reverse Opposite:
A C T G C G T A G C T A A C T G A C T G C G T A A C T G A C G T C G T A C G T A C T G A C G T A A C T G
p-value:1e-6
log p-value:-1.448e+01
Information Content per bp:1.947
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets82.5 +/- 7.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX2/MA0688.1/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTTTTACTCCTTC
-TTTCACACCTN-
 A G T C A C G T A G C T A C G T A C G T C G T A A G T C A C G T A G T C A G T C C A G T A C G T A G T C
A C G T G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T A C G T

PH0137.1_Pitx1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTTTTACTCCTTC---
NTTGTTAATCCCTCTNN
 A C G T A G T C A C G T A G C T A C G T A C G T C G T A A G T C A C G T A G T C A G T C C A G T A C G T A G T C A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

TBR1/MA0802.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTTTTACTCCTTC
-TTTCACACCT--
 A G T C A C G T A G C T A C G T A C G T C G T A A G T C A C G T A G T C A G T C C A G T A C G T A G T C
A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CTTTTACTCCTTC
--TTCACACCTT-
 A G T C A C G T A G C T A C G T A C G T C G T A A G T C A C G T A G T C A G T C C A G T A C G T A G T C
A C G T A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTTTTACTCCTTC--
NNTTTTCACACCTTNNN
 A C G T A C G T A G T C A C G T A G C T A C G T A C G T C G T A A G T C A C G T A G T C A G T C C A G T A C G T A G T C A C G T A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

EOMES/MA0800.1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTTTTACTCCTTC
NTTTTCACACCTT-
 A C G T A G T C A C G T A G C T A C G T A C G T C G T A A G T C A C G T A G T C A G T C C A G T A C G T A G T C
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTTTTACTCCTTC
-CTTCACACCTA-
 A G T C A C G T A G C T A C G T A C G T C G T A A G T C A C G T A G T C A G T C C A G T A C G T A G T C
A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A A C G T

PH0125.1_Obox5_2/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTTTTACTCCTTC--
GATAATTAATCCCTCTT
 A C G T A C G T A G T C A C G T A G C T A C G T A C G T C G T A A G T C A C G T A G T C A G T C C A G T A C G T A G T C A C G T A C G T
A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTTTTACTCCTTC
--NYTAATCCYB-
 A G T C A C G T A G C T A C G T A C G T C G T A A G T C A C G T A G T C A G T C C A G T A C G T A G T C
A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CTTTTACTCCTTC
---TTAATCCT--
 A G T C A C G T A G C T A C G T A C G T C G T A A G T C A C G T A G T C A G T C C A G T A C G T A G T C
A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T