p-value: | 1e-8 |
log p-value: | -2.047e+01 |
Information Content per bp: | 1.740 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.71% |
Number of Background Sequences with motif | 3.9 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 51.6 +/- 19.1bp |
Average Position of motif in Background | 63.9 +/- 22.7bp |
Strand Bias (log2 ratio + to - strand density) | -0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 1 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TSACCTCAAGGAGACA TGACCTYA-------- |
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NR4A2/MA0160.1/Jaspar
Match Rank: | 2 |
Score: | 0.55 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TSACCTCAAGGAGACA GTGACCTT--------- |
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Rarb(var.2)/MA0858.1/Jaspar
Match Rank: | 3 |
Score: | 0.55 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TSACCTCAAGGAGACA- TGACCTTTANTTGACCT |
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RORA/MA0071.1/Jaspar
Match Rank: | 4 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TSACCTCAAGGAGACA TGACCTTGAT------ |
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LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer
Match Rank: | 5 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TSACCTCAAGGAGACA TGACCTNTAGTAACCC |
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Nr1h3::Rxra/MA0494.1/Jaspar
Match Rank: | 6 |
Score: | 0.53 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TSACCTCAAGGAGACA--- TGACCTAAAGTAACCTCTG |
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Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer
Match Rank: | 7 |
Score: | 0.53 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TSACCTCAAGGAGACA NTGACCTTGA------- |
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Esrrg/MA0643.1/Jaspar
Match Rank: | 8 |
Score: | 0.52 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TSACCTCAAGGAGACA ATGACCTTGA------- |
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Vdr/MA0693.1/Jaspar
Match Rank: | 9 |
Score: | 0.52 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TSACCTCAAGGAGACA TGAACTCNATGAACTC |
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ESRRB/MA0141.3/Jaspar
Match Rank: | 10 |
Score: | 0.52 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TSACCTCAAGGAGACA NATGACCTTGA------- |
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