Information for 9-TGACACACAG (Motif 23)

C G A T A C T G C G T A A G T C T C G A T A G C C T G A A T G C C G T A C T A G
Reverse Opposite:
G A T C A C G T A T C G G A C T A T C G A G C T C T A G C G A T A G T C C G T A
p-value:1e-9
log p-value:-2.198e+01
Information Content per bp:1.823
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif3.41%
Number of Background Sequences with motif328.4
Percentage of Background Sequences with motif0.68%
Average Position of motif in Targets51.2 +/- 30.7bp
Average Position of motif in Background47.1 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TGACACACAG
TTGACAG----
 A C G T C G A T A C T G C G T A A G T C T C G A T A G C C T G A A T G C C G T A C T A G
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TGACACACAG
TGACTCA---
 C G A T A C T G C G T A A G T C T C G A T A G C C T G A A T G C C G T A C T A G
A G C T A C T G G T C A T G A C C G A T A T G C C G T A A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TGACACACAG
AGGTGNCAGACAG
 A C G T A C G T A C G T C G A T A C T G C G T A A G T C T C G A T A G C C T G A A T G C C G T A C T A G
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TGACACACAG
ARNTGACA-----
 A C G T A C G T A C G T C G A T A C T G C G T A A G T C T C G A T A G C C T G A A T G C C G T A C T A G
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGACACACAG-
NTGATTGACAGN
 A C G T C G A T A C T G C G T A A G T C T C G A T A G C C T G A A T G C C G T A C T A G A C G T
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGACACACAG--
TGAGTGACAGSC
 C G A T A C T G C G T A A G T C T C G A T A G C C T G A A T G C C G T A C T A G A C G T A C G T
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TGACACACAG
AGGTGHCAGACA-
 A C G T A C G T A C G T C G A T A C T G C G T A A G T C T C G A T A G C C T G A A T G C C G T A C T A G
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TGACACACAG
TTGACAGG---
 A C G T C G A T A C T G C G T A A G T C T C G A T A G C C T G A A T G C C G T A C T A G
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGACACACAG-
BTGABTGACAGS
 A C G T C G A T A C T G C G T A A G T C T C G A T A G C C T G A A T G C C G T A C T A G A C G T
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

PH0164.1_Six4/Jaspar

Match Rank:10
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TGACACACAG--
ATAAATGACACCTATCA
 A C G T A C G T A C G T A C G T A C G T C G A T A C T G C G T A A G T C T C G A T A G C C T G A A T G C C G T A C T A G A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A