Information for 12-AGGAGCCACYCTG (Motif 18)

C G T A A C T G A C T G C G T A C T A G A T G C T A G C C G T A A G T C A G C T A T G C C G A T A C T G
Reverse Opposite:
A G T C G C T A T A C G C T G A A C T G G C A T A C T G A T C G A G T C C G A T T A G C A G T C G C A T
p-value:1e-10
log p-value:-2.402e+01
Information Content per bp:1.714
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.99%
Number of Background Sequences with motif81.4
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets54.7 +/- 26.6bp
Average Position of motif in Background50.8 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0203.1_Zfp691_2/Jaspar

Match Rank:1
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----AGGAGCCACYCTG
NTNNNAGGAGTCTCNTN-
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A C T A G A T G C T A G C C G T A A G T C A G C T A T G C C G A T A C T G
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGGAGCCACYCTG
CGGAGC-------
 C G T A A C T G A C T G C G T A C T A G A T G C T A G C C G T A A G T C A G C T A T G C C G A T A C T G
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AGGAGCCACYCTG-
---AGCCACTCAAG
 C G T A A C T G A C T G C G T A C T A G A T G C T A G C C G T A A G T C A G C T A T G C C G A T A C T G A C G T
A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:4
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AGGAGCCACYCTG
---MRSCACTYAA
 C G T A A C T G A C T G C G T A C T A G A T G C T A G C C G T A A G T C A G C T A T G C C G A T A C T G
A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------AGGAGCCACYCTG-
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A C T A G A T G C T A G C C G T A A G T C A G C T A T G C C G A T A C T G A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGGAGCCACYCTG
AGGTGTCA-----
 C G T A A C T G A C T G C G T A C T A G A T G C T A G C C G T A A G T C A G C T A T G C C G A T A C T G
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.51
Offset:3
Orientation:forward strand
Alignment:AGGAGCCACYCTG
---AASCACTCAA
 C G T A A C T G A C T G C G T A C T A G A T G C T A G C C G T A A G T C A G C T A T G C C G A T A C T G
A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.50
Offset:-8
Orientation:reverse strand
Alignment:--------AGGAGCCACYCTG
TGGCCACCAGGTGGCACTNT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A C T A G A T G C T A G C C G T A A G T C A G C T A T G C C G A T A C T G
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:AGGAGCCACYCTG
GGGAGGACNG---
 C G T A A C T G A C T G C G T A C T A G A T G C T A G C C G T A A G T C A G C T A T G C C G A T A C T G
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:10
Score:0.50
Offset:-8
Orientation:forward strand
Alignment:--------AGGAGCCACYCTG
TGGCCACCAGGGGGCGCTA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A C T A G A T G C T A G C C G T A A G T C A G C T A T G C C G A T A C T G
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A A C G T A C G T