Information for 5-CTTTACGCTT (Motif 13)

G T A C C G A T A C G T G C A T G C T A T A G C A T C G A G T C A C G T A G C T
Reverse Opposite:
T C G A T G C A T C A G T A G C A T C G C G A T C G T A G T C A C G T A A C T G
p-value:1e-11
log p-value:-2.580e+01
Information Content per bp:1.683
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif5.54%
Number of Background Sequences with motif715.4
Percentage of Background Sequences with motif1.49%
Average Position of motif in Targets51.9 +/- 27.3bp
Average Position of motif in Background50.8 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax6/MA0069.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CTTTACGCTT-----
-TTCACGCATGAGTT
 G T A C C G A T A C G T G C A T G C T A T A G C A T C G A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T

Tcf7/MA0769.1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTTTACGCTT-
CCTTTGATCTTT
 A C G T G T A C C G A T A C G T G C A T G C T A T A G C A T C G A G T C A C G T A G C T A C G T
A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T

LEF1/MA0768.1/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CTTTACGCTT-
AACCCTTTGATCTTT
 A C G T A C G T A C G T A C G T G T A C C G A T A C G T G C A T G C T A T A G C A T C G A G T C A C G T A G C T A C G T
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CTTTACGCTT-
TGGACTTTGNNCTCN
 A C G T A C G T A C G T A C G T G T A C C G A T A C G T G C A T G C T A T A G C A T C G A G T C A C G T A G C T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTTTACGCTT-----------
-TTTMCGCTTSABTGAACACN
 G T A C C G A T A C G T G C A T G C T A T A G C A T C G A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T C A G T G A C T T G A C G A T C T C A G A T G C G C A T A G C T T A C G C T G A A T C G G A C T C T A G T G C A T C G A A G T C G C T A A T G C T C G A

TCF7L2/MA0523.1/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTTTACGCTT-
TNCCTTTGATCTTN
 A C G T A C G T A C G T G T A C C G A T A C G T G C A T G C T A T A G C A T C G A G T C A C G T A G C T A C G T
C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

FOXF2/MA0030.1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTTTACGCTT-
NTTGTTTACGTTNN
 A C G T A C G T A C G T G T A C C G A T A C G T G C A T G C T A T A G C A T C G A G T C A C G T A G C T A C G T
G C T A C G A T A C G T C T A G A C G T A C G T A C G T C G T A A G T C A T C G A C G T C A G T A C G T T C A G

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:8
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTTTACGCTT--
TGGACTTTGNNCTNTG
 A C G T A C G T A C G T A C G T G T A C C G A T A C G T G C A T G C T A T A G C A T C G A G T C A C G T A G C T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

TBX20/MA0689.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTTTACGCTT-
CTTCACACCTA
 G T A C C G A T A C G T G C A T G C T A T A G C A T C G A G T C A C G T A G C T A C G T
A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A

HOXD12/MA0873.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTTTACGCTT
NTTTTACGACT
 A C G T G T A C C G A T A C G T G C A T G C T A T A G C A T C G A G T C A C G T A G C T
C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T