Information for 8-CAGAGTAAAAAAAMAK (Motif 10)

A G T C C G T A A C T G C G T A A C T G A C G T C G T A T C G A C G T A C G T A C T G A C T G A T C G A G T A C C G T A A C G T
Reverse Opposite:
G T C A A C G T A C T G A C G T G A C T A G C T A C G T A C G T A C G T A C G T T C G A A G T C A C G T A G T C A C G T A C T G
p-value:1e-11
log p-value:-2.593e+01
Information Content per bp:1.797
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.2 +/- 9.2bp
Average Position of motif in Background56.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1/MA0148.3/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CAGAGTAAAAAAAMAK
CAAAGTAAACANNNN-
 A G T C C G T A A C T G C G T A A C T G A C G T C G T A T C G A C G T A C G T A C T G A C T G A T C G A G T A C C G T A A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CAGAGTAAAAAAAMAK
NNNVCTGWGYAAACASN---
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G A C G T C G T A T C G A C G T A C G T A C T G A C T G A T C G A G T A C C G T A A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A A C G T A C G T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAGAGTAAAAAAAMAK
NCTAAGTAAACA-----
 A C G T A G T C C G T A A C T G C G T A A C T G A C G T C G T A T C G A C G T A C G T A C T G A C T G A T C G A G T A C C G T A A C G T
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CAGAGTAAAAAAAMAK
NCWRWGTAAACANSV--
 A C G T A G T C C G T A A C T G C G T A A C T G A C G T C G T A T C G A C G T A C G T A C T G A C T G A T C G A G T A C C G T A A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CAGAGTAAAAAAAMAK
-AAAGTAAACA-----
 A G T C C G T A A C T G C G T A A C T G A C G T C G T A T C G A C G T A C G T A C T G A C T G A T C G A G T A C C G T A A C G T
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CAGAGTAAAAAAAMAK
-AAAGTAAACA-----
 A G T C C G T A A C T G C G T A A C T G A C G T C G T A T C G A C G T A C G T A C T G A C T G A T C G A G T A C C G T A A C G T
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CAGAGTAAAAAAAMAK
-WAAGTAAAYA-----
 A G T C C G T A A C T G C G T A A C T G A C G T C G T A T C G A C G T A C G T A C T G A C T G A T C G A G T A C C G T A A C G T
A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CAGAGTAAAAAAAMAK
-TATGTAAACANG---
 A G T C C G T A A C T G C G T A A C T G A C G T C G T A T C G A C G T A C G T A C T G A C T G A T C G A G T A C C G T A A C G T
A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G A C G T A C G T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CAGAGTAAAAAAAMAK-
-ATATCAAAACAAAACA
 A G T C C G T A A C T G C G T A A C T G A C G T C G T A T C G A C G T A C G T A C T G A C T G A T C G A G T A C C G T A A C G T A C G T
A C G T G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0186.1_Tcf3_2/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CAGAGTAAAAAAAMAK
-AGCCGAAAAAAAAAT
 A G T C C G T A A C T G C G T A A C T G A C G T C G T A T C G A C G T A C G T A C T G A C T G A T C G A G T A C C G T A A C G T
A C G T C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T