p-value: | 1e-6 |
log p-value: | -1.531e+01 |
Information Content per bp: | 1.830 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.51% |
Number of Background Sequences with motif | 3.1 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 51.3 +/- 22.6bp |
Average Position of motif in Background | 43.6 +/- 22.5bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.50 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 1 |
Score: | 0.60 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CCCTGWSCTCMCYARK ---TGACCTYA----- |
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RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer
Match Rank: | 2 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CCCTGWSCTCMCYARK TGACCTTGACCT------- |
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RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer
Match Rank: | 3 |
Score: | 0.59 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CCCTGWSCTCMCYARK TGACCTTGACCT------- |
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Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer
Match Rank: | 4 |
Score: | 0.57 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CCCTGWSCTCMCYARK --CNGTCCTCCC---- |
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COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
Match Rank: | 5 |
Score: | 0.55 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CCCTGWSCTCMCYARK ---TGACCYCT----- |
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CRE(bZIP)/Promoter/Homer
Match Rank: | 6 |
Score: | 0.55 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CCCTGWSCTCMCYARK CGGTGACGTCAC---- |
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PB0099.1_Zfp691_1/Jaspar
Match Rank: | 7 |
Score: | 0.54 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CCCTGWSCTCMCYARK CGAACAGTGCTCACTAT- |
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NR4A2/MA0160.1/Jaspar
Match Rank: | 8 |
Score: | 0.54 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCCTGWSCTCMCYARK --GTGACCTT------ |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 9 |
Score: | 0.53 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CCCTGWSCTCMCYARK ---TGACCT------- |
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Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer
Match Rank: | 10 |
Score: | 0.52 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCCTGWSCTCMCYARK --ATGACGTCAYYN-- |
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