Information for 12-CGGTCCGGCT (Motif 35)

A G T C A T C G C A T G A G C T G T A C A G T C A C T G A C T G A G T C G A C T
Reverse Opposite:
C T G A A C T G G T A C G T A C T C A G C A T G T C G A G T A C A T G C T C A G
p-value:1e-8
log p-value:-2.028e+01
Information Content per bp:1.732
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.66%
Number of Background Sequences with motif246.0
Percentage of Background Sequences with motif0.51%
Average Position of motif in Targets61.2 +/- 21.9bp
Average Position of motif in Background47.6 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CGGTCCGGCT-
-GGTCCCGCCC
 A G T C A T C G C A T G A G C T G T A C A G T C A C T G A C T G A G T C G A C T A C G T
A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C

PB0151.1_Myf6_2/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CGGTCCGGCT------
-GGNGCGNCTGTTNNN
 A G T C A T C G C A T G A G C T G T A C A G T C A C T G A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

PB0094.1_Zfp128_1/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CGGTCCGGCT----
TTNGGGTACGCCNNANN
 A C G T A C G T A C G T A G T C A T C G C A T G A G C T G T A C A G T C A C T G A C T G A G T C G A C T A C G T A C G T A C G T A C G T
G A C T C A G T C T G A T C A G A T C G A C T G A C G T C G T A A G T C C T A G G A T C G T A C G T C A G T C A C G T A C T A G T G C A

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CGGTCCGGCT
TGGGTGTGGC-
 A C G T A G T C A T C G C A T G A G C T G T A C A G T C A C T G A C T G A G T C G A C T
C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CGGTCCGGCT-
-GCTCGGSCTC
 A G T C A T C G C A T G A G C T G T A C A G T C A C T G A C T G A G T C G A C T A C G T
A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CGGTCCGGCT-
-GGTCTGGCAT
 A G T C A T C G C A T G A G C T G T A C A G T C A C T G A C T G A G T C G A C T A C G T
A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CGGTCCGGCT-
------NGCTN
 A G T C A T C G C A T G A G C T G T A C A G T C A C T G A C T G A G T C G A C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CGGTCCGGCT
NTGGGTGTGGCC
 A C G T A C G T A G T C A T C G C A T G A G C T G T A C A G T C A C T G A C T G A G T C G A C T
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

Zfx/MA0146.2/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CGGTCCGGCT--
GGGGCCGAGGCCTG
 A C G T A C G T A G T C A T C G C A T G A G C T G T A C A G T C A C T G A C T G A G T C G A C T A C G T A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CGGTCCGGCT
-GCTCCG---
 A G T C A T C G C A T G A G C T G T A C A G T C A C T G A C T G A G T C G A C T
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T