Information for 2-CTGGGGAATGGCAGAG (Motif 2)

A G T C A C G T A T C G A T C G A C T G A C T G C T G A G C T A C G A T C T A G T A C G A G T C C G T A C T A G C T G A A C T G
Reverse Opposite:
A G T C A G C T A G T C C G A T T C A G A G T C A G T C G C T A C G A T A G C T A G T C G T A C A T G C A T G C G T C A C T A G
p-value:1e-18
log p-value:-4.328e+01
Information Content per bp:1.750
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.5 +/- 25.8bp
Average Position of motif in Background59.2 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTGGGGAATGGCAGAG
-TGGGGAAGGGCM---
 A G T C A C G T A T C G A T C G A C T G A C T G C T G A G C T A C G A T C T A G T A C G A G T C C G T A C T A G C T G A A C T G
A C G T G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTGGGGAATGGCAGAG
-TGGGGA---------
 A G T C A C G T A T C G A T C G A C T G A C T G C T G A G C T A C G A T C T A G T A C G A G T C C G T A C T A G C T G A A C T G
A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GFY(?)/Promoter/Homer

Match Rank:3
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CTGGGGAATGGCAGAG
---GGGAATTGTAGT-
 A G T C A C G T A T C G A T C G A C T G A C T G C T G A G C T A C G A T C T A G T A C G A G T C C G T A C T A G C T G A A C T G
A C G T A C G T A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CTGGGGAATGGCAGAG
---NTGATTGACAGN-
 A G T C A C G T A T C G A T C G A C T G A C T G C T G A G C T A C G A T C T A G T A C G A G T C C G T A C T A G C T G A A C T G
A C G T A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:5
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CTGGGGAATGGCAGAG
---BTGABTGACAGS-
 A G T C A C G T A T C G A T C G A C T G A C T G C T G A G C T A C G A T C T A G T A C G A G T C C G T A C T A G C T G A A C T G
A C G T A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CTGGGGAATGGCAGAG-
--GGGGCTYGKCTGGGA
 A G T C A C G T A T C G A T C G A C T G A C T G C T G A G C T A C G A T C T A G T A C G A G T C C G T A C T A G C T G A A C T G A C G T
A C G T A C G T C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CTGGGGAATGGCAGAG
GTGGGGGAGGGG----
 A G T C A C G T A T C G A T C G A C T G A C T G C T G A G C T A C G A T C T A G T A C G A G T C C G T A C T A G C T G A A C T G
C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:8
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:CTGGGGAATGGCAGAG
----TGATTGGCTANN
 A G T C A C G T A T C G A T C G A C T G A C T G C T G A G C T A C G A T C T A G T A C G A G T C C G T A C T A G C T G A A C T G
A C G T A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

SPIB/MA0081.1/Jaspar

Match Rank:9
Score:0.49
Offset:1
Orientation:forward strand
Alignment:CTGGGGAATGGCAGAG
-AGAGGAA--------
 A G T C A C G T A T C G A T C G A C T G A C T G C T G A G C T A C G A T C T A G T A C G A G T C C G T A C T A G C T G A A C T G
A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EBF1/MA0154.3/Jaspar

Match Rank:10
Score:0.49
Offset:-5
Orientation:reverse strand
Alignment:-----CTGGGGAATGGCAGAG
ANTCCCTNGGGAAT-------
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A T C G A T C G A C T G A C T G C T G A G C T A C G A T C T A G T A C G A G T C C G T A C T A G C T G A A C T G
C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T