Information for 10-TYCSAYTKRATAMASC (Motif 12)

A C G T A G T C A G T C A T C G C G T A G A C T A C G T A C G T C T A G C G T A A C G T C T G A G T A C C G T A A T G C G T A C
Reverse Opposite:
A C T G A T C G A C G T A C T G A G C T C G T A A C G T G A C T G T C A C G T A C T G A A C G T A T G C A C T G C T A G C G T A
p-value:1e-12
log p-value:-2.975e+01
Information Content per bp:1.821
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.6 +/- 24.5bp
Average Position of motif in Background39.6 +/- 16.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0132.1_Hbp1_2/Jaspar

Match Rank:1
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TYCSAYTKRATAMASC
TGTTCCCATTGTGTACT--
 A C G T A C G T A C G T A C G T A G T C A G T C A T C G C G T A G A C T A C G T A C G T C T A G C G T A A C G T C T G A G T A C C G T A A T G C G T A C
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T A C G T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:2
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:TYCSAYTKRATAMASC
-----NTTGATACATT
 A C G T A G T C A G T C A T C G C G T A G A C T A C G T A C G T C T A G C G T A A C G T C T G A G T A C C G T A A T G C G T A C
A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:3
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:TYCSAYTKRATAMASC
-----TTTAAT-----
 A C G T A G T C A G T C A T C G C G T A G A C T A C G T A C G T C T A G C G T A A C G T C T G A G T A C C G T A A T G C G T A C
A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PH0069.1_Hoxc4/Jaspar

Match Rank:4
Score:0.51
Offset:2
Orientation:forward strand
Alignment:TYCSAYTKRATAMASC---
--CGAATTAATTAACAATA
 A C G T A G T C A G T C A T C G C G T A G A C T A C G T A C G T C T A G C G T A A C G T C T G A G T A C C G T A A T G C G T A C A C G T A C G T A C G T
A C G T A C G T T G A C T C A G G T C A C T G A G C A T G A C T G T C A C G T A C G A T A C G T C T G A C G T A A G T C G C T A T G C A G C A T G T C A

PB0068.1_Sox1_1/Jaspar

Match Rank:5
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TYCSAYTKRATAMASC
AATCAATTCAATAATT-
 A C G T A C G T A G T C A G T C A T C G C G T A G A C T A C G T A C G T C T A G C G T A A C G T C T G A G T A C C G T A A T G C G T A C
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:6
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:TYCSAYTKRATAMASC-----
----TCNNTTTACAGCGNNNT
 A C G T A G T C A G T C A T C G C G T A G A C T A C G T A C G T C T A G C G T A A C G T C T G A G T A C C G T A A T G C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:7
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:TYCSAYTKRATAMASC-----
----TCNNTTTACAGCGNNNT
 A C G T A G T C A G T C A T C G C G T A G A C T A C G T A C G T C T A G C G T A A C G T C T G A G T A C C G T A A T G C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0128.1_Otp/Jaspar

Match Rank:8
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:TYCSAYTKRATAMASC---
--CNNATTAATTAATTNNN
 A C G T A G T C A G T C A T C G C G T A G A C T A C G T A C G T C T A G C G T A A C G T C T G A G T A C C G T A A T G C G T A C A C G T A C G T A C G T
A C G T A C G T G T A C G T A C G T C A T C G A G A C T G A C T T C G A C T G A A G C T A C G T C T G A C T G A A G C T C G A T C T G A A G T C A C T G

POL012.1_TATA-Box/Jaspar

Match Rank:9
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--TYCSAYTKRATAMASC
NNNNNNCTTTTATAN---
 A C G T A C G T A C G T A G T C A G T C A T C G C G T A G A C T A C G T A C G T C T A G C G T A A C G T C T G A G T A C C G T A A T G C G T A C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---TYCSAYTKRATAMASC
ATTTTCCATT---------
 A C G T A C G T A C G T A C G T A G T C A G T C A T C G C G T A G A C T A C G T A C G T C T A G C G T A A C G T C T G A G T A C C G T A A T G C G T A C
C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T