Information for 5-TGACWCACAAAGTTAT (Motif 9)

A G C T A T C G G T C A A G T C C G T A A G T C C T G A A T G C C G T A G T C A C G T A A C T G A C G T A C G T C G T A A G C T
Reverse Opposite:
C T G A C G A T T G C A T C G A G T A C C G A T A C G T G A C T T A C G A G C T T C A G C G A T A C T G A C G T A T G C C T G A
p-value:1e-14
log p-value:-3.384e+01
Information Content per bp:1.707
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.14%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets40.4 +/- 27.3bp
Average Position of motif in Background66.2 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:TGACWCACAAAGTTAT
------ACAAAG----
 A G C T A T C G G T C A A G T C C G T A A G T C C T G A A T G C C G T A G T C A C G T A A C T G A C G T A C G T C G T A A G C T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T

MAF::NFE2/MA0501.1/Jaspar

Match Rank:2
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGACWCACAAAGTTAT
ATGACTCAGCAATTT--
 A C G T A G C T A T C G G T C A A G T C C G T A A G T C C T G A A T G C C G T A G T C A C G T A A C T G A C G T A C G T C G T A A G C T
T C G A A C G T A C T G C G T A A T G C C G A T G T A C C G T A C A T G A T G C C T G A C T G A C G A T G C A T G A C T A C G T A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:3
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TGACWCACAAAGTTAT
TGACTCA---------
 A G C T A T C G G T C A A G T C C G T A A G T C C T G A A T G C C G T A G T C A C G T A A C T G A C G T A C G T C G T A A G C T
A G C T A C T G G T C A T G A C C G A T A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:4
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TGACWCACAAAGTTAT
AAACAGACAAAGGAAT
 A G C T A T C G G T C A A G T C C G T A A G T C C T G A A T G C C G T A G T C A C G T A A C T G A C G T A C G T C G T A A G C T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Nr2e1/MA0676.1/Jaspar

Match Rank:5
Score:0.51
Offset:7
Orientation:forward strand
Alignment:TGACWCACAAAGTTAT
-------AAAAGTCAA
 A G C T A T C G G T C A A G T C C G T A A G T C C T G A A T G C C G T A G T C A C G T A A C T G A C G T A C G T C G T A A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

Sox1/MA0870.1/Jaspar

Match Rank:6
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:TGACWCACAAAGTTAT----
-----AACAATGNTATTGTT
 A G C T A T C G G T C A A G T C C G T A A G T C C T G A A T G C C G T A G T C A C G T A A C T G A C G T A C G T C G T A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C T G A A G T C C T G A G T C A A C G T T A C G A G C T G C A T C G T A A C G T C A G T A C T G C G A T A C G T

Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TGACWCACAAAGTTAT
ATGACTCAGCANWWT--
 A C G T A G C T A T C G G T C A A G T C C G T A A G T C C T G A A T G C C G T A G T C A C G T A A C T G A C G T A C G T C G T A A G C T
T C G A A C G T A C T G C G T A T A G C G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:TGACWCACAAAGTTAT
---VRRACAAWGG---
 A G C T A T C G G T C A A G T C C G T A A G T C C T G A A T G C C G T A G T C A C G T A A C T G A C G T A C G T C G T A A G C T
A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:9
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-TGACWCACAAAGTTAT
TTGACAG----------
 A C G T A G C T A T C G G T C A A G T C C G T A A G T C C T G A A T G C C G T A G T C A C G T A A C T G A C G T A C G T C G T A A G C T
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0142.1_Jundm2_2/Jaspar

Match Rank:10
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----TGACWCACAAAGTTAT
NNGGTGACTCATCANN----
 A C G T A C G T A C G T A C G T A G C T A T C G G T C A A G T C C G T A A G T C C T G A A T G C C G T A G T C A C G T A A C T G A C G T A C G T C G T A A G C T
C A G T G A C T C A T G T C A G A G C T A C T G C G T A A T G C C A G T T G A C C T G A A G C T G A T C T G C A G T C A A C G T A C G T A C G T A C G T A C G T