Information for 4-TGTTTACCTT (Motif 4)

C A G T T A C G A C G T C A G T G C A T C T G A A G T C G A T C A G C T C A G T
Reverse Opposite:
G T C A T C G A C T A G T C A G G A C T C G T A G T C A T G C A A T G C G T C A
p-value:1e-17
log p-value:-3.993e+01
Information Content per bp:1.663
Number of Target Sequences with motif107.0
Percentage of Target Sequences with motif13.54%
Number of Background Sequences with motif867.8
Percentage of Background Sequences with motif5.38%
Average Position of motif in Targets51.9 +/- 24.1bp
Average Position of motif in Background49.9 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXF2/MA0030.1/Jaspar

Match Rank:1
Score:0.89
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTACCTT--
NTTGTTTACGTTNN
 A C G T A C G T C A G T T A C G A C G T C A G T G C A T C T G A A G T C G A T C A G C T C A G T A C G T A C G T
G C T A C G A T A C G T C T A G A C G T A C G T A C G T C G T A A G T C A T C G A C G T C A G T A C G T T C A G

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:TGTTTACCTT
TGTTTACTTT
 C A G T T A C G A C G T C A G T G C A T C T G A A G T C G A T C A G C T C A G T
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:3
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:TGTTTACCTT
TGTTTACTTT
 C A G T T A C G A C G T C A G T G C A T C T G A A G T C G A T C A G C T C A G T
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXP1/MA0481.1/Jaspar

Match Rank:4
Score:0.86
Offset:-3
Orientation:reverse strand
Alignment:---TGTTTACCTT--
CTTTGTTTACTTTTN
 A C G T A C G T A C G T C A G T T A C G A C G T C A G T G C A T C T G A A G T C G A T C A G C T C A G T A C G T A C G T
A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

Foxk1/MA0852.1/Jaspar

Match Rank:5
Score:0.86
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTTACCTT--
NNNTTTGTTTACATTTN
 A C G T A C G T A C G T A C G T A C G T C A G T T A C G A C G T C A G T G C A T C T G A A G T C G A T C A G C T C A G T A C G T A C G T
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

PB0018.1_Foxk1_1/Jaspar

Match Rank:6
Score:0.86
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTTACCTT--
NNNTTTGTTTACATTTN
 A C G T A C G T A C G T A C G T A C G T C A G T T A C G A C G T C A G T G C A T C T G A A G T C G A T C A G C T C A G T A C G T A C G T
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

Foxj3/MA0851.1/Jaspar

Match Rank:7
Score:0.86
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTTACCTT--
NNNTTTGTTTACNTTNN
 A C G T A C G T A C G T A C G T A C G T C A G T T A C G A C G T C A G T G C A T C T G A A G T C G A T C A G C T C A G T A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:8
Score:0.86
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTTACCTT--
NNNTTTGTTTACNTTNN
 A C G T A C G T A C G T A C G T A C G T C A G T T A C G A C G T C A G T G C A T C T G A A G T C G A T C A G C T C A G T A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

FOXA1/MA0148.3/Jaspar

Match Rank:9
Score:0.86
Offset:-4
Orientation:forward strand
Alignment:----TGTTTACCTT-
TCCATGTTTACTTTG
 A C G T A C G T A C G T A C G T C A G T T A C G A C G T C A G T G C A T C T G A A G T C G A T C A G C T C A G T A C G T
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G

FOXP2/MA0593.1/Jaspar

Match Rank:10
Score:0.85
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTACCTT
TNTGTTTACTT-
 A C G T A C G T C A G T T A C G A C G T C A G T G C A T C T G A A G T C G A T C A G C T C A G T
G A C T A G C T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C A T G A C T A C G T