Information for 12-CCAVRGAGAGAGG (Motif 16)

A G T C G T A C C G T A T A G C C T A G A T C G C G T A A C T G C G T A A C T G C G T A A C T G C T A G
Reverse Opposite:
A G T C A G T C C G A T A G T C A C G T A G T C A C G T A T G C A G T C A C T G C G A T A C T G A C T G
p-value:1e-10
log p-value:-2.490e+01
Information Content per bp:1.837
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.4 +/- 32.9bp
Average Position of motif in Background51.7 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCAVRGAGAGAGG-
NNNACCGAGAGTNNN
 A C G T A G T C G T A C C G T A T A G C C T A G A T C G C G T A A C T G C G T A A C T G C G T A A C T G C T A G A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CCAVRGAGAGAGG-----
----GGAGAAAGGTGCGA
 A G T C G T A C C G T A T A G C C T A G A T C G C G T A A C T G C G T A A C T G C G T A A C T G C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

REST/MA0138.2/Jaspar

Match Rank:3
Score:0.53
Offset:-7
Orientation:forward strand
Alignment:-------CCAVRGAGAGAGG-
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C C G T A T A G C C T A G A T C G C G T A A C T G C G T A A C T G C G T A A C T G C T A G A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CCAVRGAGAGAGG
-GAAAGTGAAAGT
 A G T C G T A C C G T A T A G C C T A G A T C G C G T A A C T G C G T A A C T G C G T A A C T G C T A G
A C G T T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

PB0166.1_Sox12_2/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CCAVRGAGAGAGG---
AAACAGACAAAGGAAT
 A G T C G T A C C G T A T A G C C T A G A T C G C G T A A C T G C G T A A C T G C G T A A C T G C T A G A C G T A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CCAVRGAGAGAGG---
-GTAGGGCAAAGGTCA
 A G T C G T A C C G T A T A G C C T A G A T C G C G T A A C T G C G T A A C T G C G T A A C T G C T A G A C G T A C G T A C G T
A C G T A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

PB0138.1_Irf4_2/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CCAVRGAGAGAGG-
GNNACCGAGAATNNN
 A C G T A G T C G T A C C G T A T A G C C T A G A T C G C G T A A C T G C G T A A C T G C G T A A C T G C T A G A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

Gata4/MA0482.1/Jaspar

Match Rank:8
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CCAVRGAGAGAGG-
---NNGAGATAAGA
 A G T C G T A C C G T A T A G C C T A G A T C G C G T A A C T G C G T A A C T G C G T A A C T G C T A G A C G T
A C G T A C G T A C G T T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A

KLF5/MA0599.1/Jaspar

Match Rank:9
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:CCAVRGAGAGAGG-
----GGGGNGGGGC
 A G T C G T A C C G T A T A G C C T A G A T C G C G T A A C T G C G T A A C T G C G T A A C T G C T A G A C G T
A C G T A C G T A C G T A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C

E2F6/MA0471.1/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CCAVRGAGAGAGG-
---GGGCGGGAAGG
 A G T C G T A C C G T A T A G C C T A G A T C G C G T A A C T G C G T A A C T G C G T A A C T G C T A G A C G T
A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G