Information for 7-ATGTAATGCATGTBTG (Motif 15)

C G T A C G A T A C T G A C G T T G C A C G T A C G A T A C T G A G T C C G T A A C G T A C T G A C G T A T G C A C G T A C T G
Reverse Opposite:
A G T C C G T A T A C G G T C A G T A C C G T A C G A T C T A G A G T C C G T A A C G T A C G T C G T A T G A C C G T A A C G T
p-value:1e-11
log p-value:-2.611e+01
Information Content per bp:1.810
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets55.5 +/- 29.2bp
Average Position of motif in Background16.9 +/- 12.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:ATGTAATGCATGTBTG-
-NGTCACGCTTGGCTGC
 C G T A C G A T A C T G A C G T T G C A C G T A C G A T A C T G A G T C C G T A A C G T A C T G A C G T A T G C A C G T A C T G A C G T
A C G T C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:ATGTAATGCATGTBTG-
--GTCATGCHTGRCTGS
 C G T A C G A T A C T G A C G T T G C A C G T A C G A T A C T G A G T C C G T A A C G T A C T G A C G T A T G C A C G T A C T G A C G T
A C G T A C G T A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

PAX9/MA0781.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ATGTAATGCATGTBTG--
-CGTCACGCATGACTGCA
 C G T A C G A T A C T G A C G T T G C A C G T A C G A T A C T G A G T C C G T A A C G T A C T G A C G T A T G C A C G T A C T G A C G T A C G T
A C G T A T G C A C T G G C A T A G T C T G C A A G T C A C T G A T G C G C T A G A C T A T C G C T G A T A G C G A C T C A T G T G A C G T C A

PAX1/MA0779.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ATGTAATGCATGTBTG--
-CGTCACGCATGACTGCA
 C G T A C G A T A C T G A C G T T G C A C G T A C G A T A C T G A G T C C G T A A C G T A C T G A C G T A T G C A C G T A C T G A C G T A C G T
A C G T A T G C C A T G G C A T G A T C T G C A G A T C C A T G A T G C G C T A G A C T A T C G T C G A T A G C G A C T C A T G T G A C G T C A

PAX5/MA0014.2/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:ATGTAATGCATGTBTG-----
--GTCACGCTTGGCTGCNCNN
 C G T A C G A T A C T G A C G T T G C A C G T A C G A T A C T G A G T C C G T A A C G T A C T G A C G T A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G G A C T A G T C G T C A G A T C T C A G T A G C G A C T A G C T A T C G T C A G A T G C G A C T C T A G T G A C G A T C A G T C G C A T A G T C

Pax6/MA0069.1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:ATGTAATGCATGTBTG
--TTCACGCATGAGTT
 C G T A C G A T A C T G A C G T T G C A C G T A C G A T A C T G A G T C C G T A A C G T A C T G A C G T A T G C A C G T A C T G
A C G T A C G T A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T

PB0178.1_Sox8_2/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ATGTAATGCATGTBTG
NNTNTCATGAATGT---
 A C G T C G T A C G A T A C T G A C G T T G C A C G T A C G A T A C T G A G T C C G T A A C G T A C T G A C G T A T G C A C G T A C T G
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ATGTAATGCATGTBTG
TNNATTATGCATANNTT
 A C G T C G T A C G A T A C T G A C G T T G C A C G T A C G A T A C T G A G T C C G T A A C G T A C T G A C G T A T G C A C G T A C T G
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

PH0088.1_Isl2/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-ATGTAATGCATGTBTG
AAATTAATTGATTTNG-
 A C G T C G T A C G A T A C T G A C G T T G C A C G T A C G A T A C T G A G T C C G T A A C G T A C T G A C G T A T G C A C G T A C T G
C T G A G C T A G T C A G A C T G C A T C G T A C G T A A C G T A C G T C T A G T C G A C A G T C A G T C A G T C G A T C A T G A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:ATGTAATGCATGTBTG-
NTTNTATGAATGTGNNC
 C G T A C G A T A C T G A C G T T G C A C G T A C G A T A C T G A G T C C G T A A C G T A C T G A C G T A T G C A C G T A C T G A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C