Information for 1-KCTATTTTTRGMH (Motif 1)

C A G T A G T C G A C T C G T A C G A T C G A T G A C T G C A T C G A T C T G A C A T G G T C A G C T A
Reverse Opposite:
C G A T C A G T G T A C G A C T G C T A C G T A C T G A C G T A G C T A G C A T C T G A T C A G G T C A
p-value:1e-128
log p-value:-2.950e+02
Information Content per bp:1.573
Number of Target Sequences with motif268.0
Percentage of Target Sequences with motif33.92%
Number of Background Sequences with motif922.1
Percentage of Background Sequences with motif5.72%
Average Position of motif in Targets52.2 +/- 22.5bp
Average Position of motif in Background49.9 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.99
Offset:0
Orientation:reverse strand
Alignment:KCTATTTTTRGMH
KCTATTTTTRGH-
 C A G T A G T C G A C T C G T A C G A T C G A T G A C T G C A T C G A T C T G A C A T G G T C A G C T A
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:2
Score:0.98
Offset:0
Orientation:forward strand
Alignment:KCTATTTTTRGMH
GCTATTTTTGGM-
 C A G T A G T C G A C T C G T A C G A T C G A T G A C T G C A T C G A T C T G A C A T G G T C A G C T A
C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:3
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-KCTATTTTTRGMH-
TTCTATTTTTAGNNN
 A C G T C A G T A G T C G A C T C G T A C G A T C G A T G A C T G C A T C G A T C T G A C A T G G T C A G C T A A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:4
Score:0.97
Offset:0
Orientation:forward strand
Alignment:KCTATTTTTRGMH
GCTATTTTTAGC-
 C A G T A G T C G A C T C G T A C G A T C G A T G A C T G C A T C G A T C T G A C A T G G T C A G C T A
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:KCTATTTTTRGMH
-CTATTTTTGG--
 C A G T A G T C G A C T C G T A C G A T C G A T G A C T G C A T C G A T C T G A C A T G G T C A G C T A
A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G A C G T A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:6
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:KCTATTTTTRGMH
TCTATTTTTAGA-
 C A G T A G T C G A C T C G T A C G A T C G A T G A C T G C A T C G A T C T G A C A T G G T C A G C T A
C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:7
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:KCTATTTTTRGMH
TCTATTTATAGN-
 C A G T A G T C G A C T C G T A C G A T C G A T G A C T G C A T C G A T C T G A C A T G G T C A G C T A
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:8
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:KCTATTTTTRGMH
GCTATTTATAGC-
 C A G T A G T C G A C T C G T A C G A T C G A T G A C T G C A T C G A T C T G A C A T G G T C A G C T A
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C A C G T

MF0008.1_MADS_class/Jaspar

Match Rank:9
Score:0.84
Offset:1
Orientation:forward strand
Alignment:KCTATTTTTRGMH
-CCATATATGG--
 C A G T A G T C G A C T C G T A C G A T C G A T G A C T G C A T C G A T C T G A C A T G G T C A G C T A
A C G T G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G A C G T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:10
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----KCTATTTTTRGMH
NNNNNNCTTTTATAN--
 A C G T A C G T A C G T A C G T C A G T A G T C G A C T C G T A C G A T C G A T G A C T G C A T C G A T C T G A C A T G G T C A G C T A
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T