Information for 5-TTTGCCAKCMYWCTGC (Motif 6)

A C G T A C G T C G A T A T C G G T A C G T A C G C T A A C G T G T A C T G A C G A C T G C A T A T G C A G C T A C T G A T G C
Reverse Opposite:
A T C G T G A C C T G A A T C G C G T A C T G A A C T G A C T G T G C A C G A T A C T G A C T G T A G C C G T A G T C A G T C A
p-value:1e-14
log p-value:-3.321e+01
Information Content per bp:1.651
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif4.14%
Number of Background Sequences with motif279.9
Percentage of Background Sequences with motif0.60%
Average Position of motif in Targets52.0 +/- 23.0bp
Average Position of motif in Background49.7 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0029.1_Hic1_1/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTTGCCAKCMYWCTGC
ACTATGCCAACCTACC--
 A C G T A C G T A C G T A C G T C G A T A T C G G T A C G T A C G C T A A C G T G T A C T G A C G A C T G C A T A T G C A G C T A C T G A T G C
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTTGCCAKCMYWCTGC
TTTTCCA---------
 A C G T A C G T C G A T A T C G G T A C G T A C G C T A A C G T G T A C T G A C G A C T G C A T A T G C A G C T A C T G A T G C
C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TTTGCCAKCMYWCTGC
-ATGCCAACC------
 A C G T A C G T C G A T A T C G G T A C G T A C G C T A A C G T G T A C T G A C G A C T G C A T A T G C A G C T A C T G A T G C
A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TTTGCCAKCMYWCTGC
ATTTTCCATT-------
 A C G T A C G T A C G T C G A T A T C G G T A C G T A C G C T A A C G T G T A C T G A C G A C T G C A T A T G C A G C T A C T G A T G C
C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTTGCCAKCMYWCTGC
ATTTCCCAGVAKSCY--
 A C G T A C G T A C G T C G A T A T C G G T A C G T A C G C T A A C G T G T A C T G A C G A C T G C A T A T G C A G C T A C T G A T G C
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TTTGCCAKCMYWCTGC
ATTTTCCATT-------
 A C G T A C G T A C G T C G A T A T C G G T A C G T A C G C T A A C G T G T A C T G A C G A C T G C A T A T G C A G C T A C T G A T G C
C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TTTGCCAKCMYWCTGC
-CTGCCCGCA------
 A C G T A C G T C G A T A T C G G T A C G T A C G C T A A C G T G T A C T G A C G A C T G C A T A T G C A G C T A C T G A T G C
A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TTTGCCAKCMYWCTGC
ATTTTCCATT-------
 A C G T A C G T A C G T C G A T A T C G G T A C G T A C G C T A A C G T G T A C T G A C G A C T G C A T A T G C A G C T A C T G A T G C
C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TTTGCCAKCMYWCTGC
-TTGCCAAG-------
 A C G T A C G T C G A T A T C G G T A C G T A C G C T A A C G T G T A C T G A C G A C T G C A T A T G C A G C T A C T G A T G C
A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TTTGCCAKCMYWCTGC
ATTTTCCATT-------
 A C G T A C G T A C G T C G A T A T C G G T A C G T A C G C T A A C G T G T A C T G A C G A C T G C A T A T G C A G C T A C T G A T G C
C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T