Information for 4-AACTTGAATTTGTTTC (Motif 5)

C T G A C G T A A G T C A C G T C A G T A C T G C G T A C G T A A G C T A G C T C G A T C A T G C G A T A G C T A C G T T G A C
Reverse Opposite:
A C T G C G T A C T G A C G T A G A T C C G T A T C G A C T G A G A C T A C G T T G A C G T C A C G T A A C T G A C G T A G C T
p-value:1e-14
log p-value:-3.340e+01
Information Content per bp:1.721
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.0 +/- 29.2bp
Average Position of motif in Background44.2 +/- 17.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0114.1_Nkx2-5/Jaspar

Match Rank:1
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AACTTGAATTTGTTTC
TAAGCCACTTGAATTT-----
 A C G T A C G T A C G T A C G T A C G T C T G A C G T A A G T C A C G T C A G T A C T G C G T A C G T A A G C T A G C T C G A T C A T G C G A T A G C T A C G T T G A C
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T A C G T A C G T A C G T A C G T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:2
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----AACTTGAATTTGTTTC
TAAGCCACTTGAAATT-----
 A C G T A C G T A C G T A C G T A C G T C T G A C G T A A G T C A C G T C A G T A C T G C G T A C G T A A G C T A G C T C G A T C A T G C G A T A G C T A C G T T G A C
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T A C G T A C G T A C G T A C G T A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AACTTGAATTTGTTTC
-CCTTTGATCTTT---
 C T G A C G T A A G T C A C G T C A G T A C T G C G T A C G T A A G C T A G C T C G A T C A T G C G A T A G C T A C G T T G A C
A C G T A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T A C G T A C G T A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:4
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----AACTTGAATTTGTTTC
TAAGCCACTTGAAATT-----
 A C G T A C G T A C G T A C G T A C G T C T G A C G T A A G T C A C G T C A G T A C T G C G T A C G T A A G C T A G C T C G A T C A T G C G A T A G C T A C G T T G A C
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T A C G T A C G T A C G T A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AACTTGAATTTGTTTC
-ACTTTCGTTTCT---
 C T G A C G T A A G T C A C G T C A G T A C T G C G T A C G T A A G C T A G C T C G A T C A T G C G A T A G C T A C G T T G A C
A C G T T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T A C G T A C G T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AACTTGAATTTGTTTC
ATGACCTTGAA--------
 A C G T A C G T A C G T C T G A C G T A A G T C A C G T C A G T A C T G C G T A C G T A A G C T A G C T C G A T C A T G C G A T A G C T A C G T T G A C
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:7
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----AACTTGAATTTGTTTC
GCTGACCTTGAACTN-----
 A C G T A C G T A C G T A C G T C T G A C G T A A G T C A C G T C A G T A C T G C G T A C G T A A G C T A G C T C G A T C A T G C G A T A G C T A C G T T G A C
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T A C G T A C G T A C G T A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---AACTTGAATTTGTTTC
NNTNTCATGAATGT-----
 A C G T A C G T A C G T C T G A C G T A A G T C A C G T C A G T A C T G C G T A C G T A A G C T A G C T C G A T C A T G C G A T A G C T A C G T T G A C
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AACTTGAATTTGTTTC
---TTGACTTTT----
 C T G A C G T A A G T C A C G T C A G T A C T G C G T A C G T A A G C T A G C T C G A T C A T G C G A T A G C T A C G T T G A C
A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----AACTTGAATTTGTTTC
ATAACCACTTGAAAATT----
 A C G T A C G T A C G T A C G T A C G T C T G A C G T A A G T C A C G T C A G T A C T G C G T A C G T A A G C T A G C T C G A T C A T G C G A T A G C T A C G T T G A C
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T A C G T A C G T A C G T A C G T