Information for 12-CTGCATGGTA (Motif 45)

A G T C A C G T A C T G A G T C C G T A A C G T A C T G A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A G T C C G T A A C G T A C T G A G T C C G T A A C T G
p-value:1e-2
log p-value:-6.439e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.30%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets69.0 +/- 26.5bp
Average Position of motif in Background37.0 +/- 43.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTGCATGGTA
DCTCAGCAGG---
 A C G T A C G T A C G T A G T C A C G T A C T G A G T C C G T A A C G T A C T G A C T G A C G T C G T A
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------CTGCATGGTA
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C C G T A A C G T A C T G A C T G A C G T C G T A
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CTGCATGGTA
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C C G T A A C G T A C T G A C T G A C G T C G T A
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTGCATGGTA
-TGCGTG---
 A G T C A C G T A C T G A G T C C G T A A C G T A C T G A C T G A C G T C G T A
A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:5
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------CTGCATGGTA--
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C C G T A A C G T A C T G A C T G A C G T C G T A A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTGCATGGTA
TTGCGTGCVA
 A G T C A C G T A C T G A G T C C G T A A C G T A C T G A C T G A C G T C G T A
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CTGCATGGTA
GAGCACAGCAGGACA
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C C G T A A C G T A C T G A C T G A C G T C G T A
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

STAT3/MA0144.2/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTGCATGGTA-
CTTCTGGGAAA
 A G T C A C G T A C T G A G T C C G T A A C G T A C T G A C T G A C G T C G T A A C G T
A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

GCM1/MA0646.1/Jaspar

Match Rank:9
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CTGCATGGTA
GTACCCGCATN---
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C C G T A A C G T A C T G A C T G A C G T C G T A
T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----CTGCATGGTA
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C C G T A A C G T A C T G A C T G A C G T C G T A
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A