Information for 23-CCGAGGATTTTTGTCC (Motif 44)

A G T C A G T C A C T G G T C A A C T G C T A G G T C A A C G T A C G T A C G T A C G T A C G T A C T G G C A T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A G T C C G T A C G T A C G T A C G T A C G T A A C G T A G T C A G T C A C G T G T A C A C T G A C T G
p-value:1e-3
log p-value:-9.183e+00
Information Content per bp:1.926
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.30%
Number of Background Sequences with motif0.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.8 +/- 23.5bp
Average Position of motif in Background84.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:1
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CCGAGGATTTTTGTCC
----TGATTTATGGCC
 A G T C A G T C A C T G G T C A A C T G C T A G G T C A A C G T A C G T A C G T A C G T A C G T A C T G G C A T A G T C A G T C
A C G T A C G T A C G T A C G T C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

Hoxc9/MA0485.1/Jaspar

Match Rank:2
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CCGAGGATTTTTGTCC
---NTGATTTATGGCC
 A G T C A G T C A C T G G T C A A C T G C T A G G T C A A C G T A C G T A C G T A C G T A C G T A C T G G C A T A G T C A G T C
A C G T A C G T A C G T T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:3
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CCGAGGATTTTTGTCC
----TGATTTATGGCC
 A G T C A G T C A C T G G T C A A C T G C T A G G T C A A C G T A C G T A C G T A C G T A C G T A C T G G C A T A G T C A G T C
A C G T A C G T A C G T A C G T C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.50
Offset:7
Orientation:forward strand
Alignment:CCGAGGATTTTTGTCC-
-------YCTTTGTTCC
 A G T C A G T C A C T G G T C A A C T G C T A G G T C A A C G T A C G T A C G T A C G T A C G T A C T G G C A T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:5
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:CCGAGGATTTTTGTCC----
------TTTTTTTTCNNGTN
 A G T C A G T C A C T G G T C A A C T G C T A G G T C A A C G T A C G T A C G T A C G T A C G T A C T G G C A T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

PB0146.1_Mafk_2/Jaspar

Match Rank:6
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CCGAGGATTTTTGTCC
CCTTGCAATTTTTNN-
 A G T C A G T C A C T G G T C A A C T G C T A G G T C A A C G T A C G T A C G T A C G T A C G T A C T G G C A T A G T C A G T C
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C A C G T

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.49
Offset:7
Orientation:forward strand
Alignment:CCGAGGATTTTTGTCC-
-------CCTTTGTTTT
 A G T C A G T C A C T G G T C A A C T G C T A G G T C A A C G T A C G T A C G T A C G T A C G T A C T G G C A T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:CCGAGGATTTTTGTCC----
-----WCATTTTGKCCTCYT
 A G T C A G T C A C T G G T C A A C T G C T A G G T C A A C G T A C G T A C G T A C G T A C G T A C T G G C A T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:9
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:CCGAGGATTTTTGTCC
----TGATTTATGGC-
 A G T C A G T C A C T G G T C A A C T G C T A G G T C A A C G T A C G T A C G T A C G T A C G T A C T G G C A T A G T C A G T C
A C G T A C G T A C G T A C G T C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C A C G T

Rarg/MA0859.1/Jaspar

Match Rank:10
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:CCGAGGATTTTTGTCC--
--TTGACCTTTTGACCTT
 A G T C A G T C A C T G G T C A A C T G C T A G G T C A A C G T A C G T A C G T A C G T A C G T A C T G G C A T A G T C A G T C A C G T A C G T
A C G T A C G T C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T