Information for 8-CAGATTTCAG (Motif 42)

A G T C C G T A A C T G G T C A G A C T C A G T A C G T G T A C C G T A A T C G
Reverse Opposite:
A T G C C G A T A C T G C G T A G T C A C T G A A C G T T G A C C G A T A C T G
p-value:1e-6
log p-value:-1.563e+01
Information Content per bp:1.830
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.66%
Number of Background Sequences with motif272.2
Percentage of Background Sequences with motif0.58%
Average Position of motif in Targets61.9 +/- 22.7bp
Average Position of motif in Background49.8 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----CAGATTTCAG---
GACAGAGATATCAGTGT
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G G T C A G A C T C A G T A C G T G T A C C G T A A T C G A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CAGATTTCAG-
-TGGTTTCAGT
 A G T C C G T A A C T G G T C A G A C T C A G T A C G T G T A C C G T A A T C G A C G T
A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CAGATTTCAG--
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G G T C A G A C T C A G T A C G T G T A C C G T A A T C G A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CAGATTTCAG
GKVTCADRTTWC--
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G G T C A G A C T C A G T A C G T G T A C C G T A A T C G
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T A C G T

PKNOX1/MA0782.1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CAGATTTCAG
TGACAGGTGTCA-
 A C G T A C G T A C G T A G T C C G T A A C T G G T C A G A C T C A G T A C G T G T A C C G T A A T C G
G A C T T A C G C T G A G T A C C T G A C A T G T A C G A G C T T C A G G C A T T A G C C G T A A C G T

TGIF2/MA0797.1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CAGATTTCAG
TGACAGCTGTCA-
 A C G T A C G T A C G T A G T C C G T A A C T G G T C A G A C T C A G T A C G T G T A C C G T A A T C G
G C A T C T A G C T G A G A T C C T G A C A T G T A G C G A C T C T A G G A C T A T G C C G T A A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAGATTTCAG
CAAAGGTCAG
 A G T C C G T A A C T G G T C A G A C T C A G T A C G T G T A C C G T A A T C G
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

PKNOX2/MA0783.1/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CAGATTTCAG
TGACAGGTGTCA-
 A C G T A C G T A C G T A G T C C G T A A C T G G T C A G A C T C A G T A C G T G T A C C G T A A T C G
C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A A C G T

TGIF1/MA0796.1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CAGATTTCAG
TGACAGCTGTCA-
 A C G T A C G T A C G T A G T C C G T A A C T G G T C A G A C T C A G T A C G T G T A C C G T A A T C G
G C A T T C A G T C G A A G T C T C G A A C T G T A G C A G C T T A C G G C A T G T A C C G T A A C G T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CAGATTTCAG
TCCAGATGTT--
 A C G T A C G T A G T C C G T A A C T G G T C A G A C T C A G T A C G T G T A C C G T A A T C G
A C G T T G A C A G T C C G T A A T C G G T C A A C G T A T C G A G C T A C G T A C G T A C G T