Information for 7-AGGGCTAAAA (Motif 41)

C G T A A C T G A T C G A C T G A G T C A C G T C G T A C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C G T C G T A A C T G A G T C A T G C A G T C A C G T
p-value:1e-7
log p-value:-1.635e+01
Information Content per bp:1.961
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif7.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets41.6 +/- 10.3bp
Average Position of motif in Background42.1 +/- 14.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0064.1_Hoxb9/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGGGCTAAAA----
AGAGCCATAAAATTCG
 A C G T A C G T C G T A A C T G A T C G A C T G A G T C A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G

CDX2/MA0465.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGGGCTAAAA
AAGCCATAAAA
 A C G T C G T A A C T G A T C G A C T G A G T C A C G T C G T A C G T A C G T A C G T A
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A

MEF2A/MA0052.3/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AGGGCTAAAA-----
---TCTAAAAATAGA
 C G T A A C T G A T C G A C T G A G T C A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AGGGCTAAAA-----
---GCTAAAAATAGC
 C G T A A C T G A T C G A C T G A G T C A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

MEF2B/MA0660.1/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AGGGCTAAAA-----
---GCTATAAATAGC
 C G T A A C T G A T C G A C T G A G T C A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

PB0118.1_Esrra_2/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----AGGGCTAAAA---
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T A C G T C G T A A C T G A T C G A C T G A G T C A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGGGCTAAAA
AGGCCTNG--
 C G T A A C T G A T C G A C T G A G T C A C G T C G T A C G T A C G T A C G T A
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AGGGCTAAAA-----
---ACTATAAATAGA
 C G T A A C T G A T C G A C T G A G T C A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGGGCTAAAA
TTCGCGCGAAAA
 A C G T A C G T C G T A A C T G A T C G A C T G A G T C A C G T C G T A C G T A C G T A C G T A
A G C T A G C T T A G C A T C G A G T C A C T G A T G C A T C G T C G A C T G A T C G A C T G A

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGGGCTAAAA-
-GTCATAAAAN
 C G T A A C T G A T C G A C T G A G T C A C G T C G T A C G T A C G T A C G T A A C G T
A C G T T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T