Information for 20-GTDACCAGCATAC (Motif 37)

T A C G A C G T C A G T C T G A A G T C G T A C C G T A A C T G A G T C C G T A G A C T G C T A A G T C
Reverse Opposite:
A C T G C A G T C G T A A C G T A C T G A G T C C G A T A C T G C T A G G A C T G C T A C G T A A G T C
p-value:1e-7
log p-value:-1.739e+01
Information Content per bp:1.766
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.6 +/- 26.5bp
Average Position of motif in Background46.6 +/- 15.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GCM2/MA0767.1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GTDACCAGCATAC
--TACCCGCATN-
 T A C G A C G T C A G T C T G A A G T C G T A C C G T A A C T G A G T C C G T A G A C T G C T A A G T C
A C G T A C G T G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTDACCAGCATAC--
TCGTACCCGCATCATT
 A C G T T A C G A C G T C A G T C T G A A G T C G T A C C G T A A C T G A G T C C G T A G A C T G C T A A G T C A C G T A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

GCM1/MA0646.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTDACCAGCATAC
-GTACCCGCATN-
 T A C G A C G T C A G T C T G A A G T C G T A C C G T A A C T G A G T C C G T A G A C T G C T A A G T C
A C G T T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G A C G T

NRL/MA0842.1/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GTDACCAGCATAC-
---GTCAGCANNTN
 T A C G A C G T C A G T C T G A A G T C G T A C C G T A A C T G A G T C C G T A G A C T G C T A A G T C A C G T
A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GTDACCAGCATAC-
ATTTCCCAGVAKSCY
 A C G T T A C G A C G T C A G T C T G A A G T C G T A C C G T A A C T G A G T C C G T A G A C T G C T A A G T C A C G T
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

PB0130.1_Gm397_2/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GTDACCAGCATAC------
---AGCGGCACACACGCAA
 T A C G A C G T C A G T C T G A A G T C G T A C C G T A A C T G A G T C C G T A G A C T G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTDACCAGCATAC-
KGTTGCTAGGMAACA
 A C G T T A C G A C G T C A G T C T G A A G T C G T A C C G T A A C T G A G T C C G T A G A C T G C T A A G T C A C G T
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GTDACCAGCATAC-----
---ATTTGCATACAATGG
 T A C G A C G T C A G T C T G A A G T C G T A C C G T A A C T G A G T C C G T A G A C T G C T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

MAFK/MA0496.1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GTDACCAGCATAC-
CTGAGTCAGCAATTT
 A C G T T A C G A C G T C A G T C T G A A G T C G T A C C G T A A C T G A G T C C G T A G A C T G C T A A G T C A C G T
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GTDACCAGCATAC
-TGCCCAGNHW--
 T A C G A C G T C A G T C T G A A G T C G T A C C G T A A C T G A G T C C G T A G A C T G C T A A G T C
A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T