Information for 16-TTHATTGCCTTGC (Motif 33)

A C G T A C G T G A T C G T C A C G A T A C G T A C T G A G T C G T A C A C G T A C G T A C T G G T A C
Reverse Opposite:
A C T G G T A C C G T A C G T A A C T G A C T G A G T C C G T A C G T A A C G T C A T G G T C A C G T A
p-value:1e-8
log p-value:-1.966e+01
Information Content per bp:1.847
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif8.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets53.9 +/- 19.3bp
Average Position of motif in Background63.2 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTHATTGCCTTGC
NNACTTGCCTT--
 A C G T A C G T G A T C G T C A C G A T A C G T A C T G A G T C G T A C A C G T A C G T A C T G G T A C
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TTHATTGCCTTGC
--BNTGDCCTTG-
 A C G T A C G T G A T C G T C A C G A T A C G T A C T G A G T C G T A C A C G T A C G T A C T G G T A C
A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TTHATTGCCTTGC-
----TGACCTTGAN
 A C G T A C G T G A T C G T C A C G A T A C G T A C T G A G T C G T A C A C G T A C G T A C T G G T A C A C G T
A C G T A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TTHATTGCCTTGC-
----TGACCTTGAV
 A C G T A C G T G A T C G T C A C G A T A C G T A C T G A G T C G T A C A C G T A C G T A C T G G T A C A C G T
A C G T A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

PH0013.1_Cdx2/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTHATTGCCTTGC
NAATTTTATTACCNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C G T C A C G A T A C G T A C T G A G T C G T A C A C G T A C G T A C T G G T A C
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T A C G T

Hmx1/MA0896.1/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TTHATTGCCTTGC
ANNCATTAATTGCTNGN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G T C A C G A T A C G T A C T G A G T C G T A C A C G T A C G T A C T G G T A C
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TTHATTGCCTTGC
ANNCATTAATTGCTNGN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G T C A C G A T A C G T A C T G A G T C G T A C A C G T A C G T A C T G G T A C
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TTHATTGCCTTGC----
--GCTGACCTTGAACTN
 A C G T A C G T G A T C G T C A C G A T A C G T A C T G A G T C G T A C A C G T A C G T A C T G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

PH0012.1_Cdx1/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TTHATTGCCTTGC
NAATTTTATTACCTNN-
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C G T C A C G A T A C G T A C T G A G T C G T A C A C G T A C G T A C T G G T A C
C G A T G T C A T C G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T G A C T G C T A A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTHATTGCCTTGC
TTTTTATTGC-----
 A C G T A C G T A C G T A C G T G A T C G T C A C G A T A C G T A C T G A G T C G T A C A C G T A C G T A C T G G T A C
C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C A C G T A C G T A C G T A C G T A C G T