Information for 14-AMCTCARTAATRA (Motif 29)

C G T A G T A C A G T C A C G T A G T C C G T A T C A G A C G T C G T A C T G A A C G T C T A G C G T A
Reverse Opposite:
A C G T A G T C C G T A A G C T A C G T C G T A A G C T A C G T A C T G C G T A A C T G A C T G A C G T
p-value:1e-8
log p-value:-2.016e+01
Information Content per bp:1.892
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.6 +/- 27.8bp
Average Position of motif in Background46.2 +/- 8.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0150.1_Pou4f3/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-AMCTCARTAATRA--
GACNTCATTAATAANN
 A C G T C G T A G T A C A G T C A C G T A G T C C G T A T C A G A C G T C G T A C T G A A C G T C T A G C G T A A C G T A C G T
C T A G C T G A T G A C G A T C C A G T G T A C C G T A C G A T C G A T C G T A C T G A C G A T C G T A G T C A A G T C C G A T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---AMCTCARTAATRA-
NNNACCTCATTATCNTN
 A C G T A C G T A C G T C G T A G T A C A G T C A C G T A G T C C G T A T C A G A C G T C G T A C T G A A C G T C T A G C G T A A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

POU6F2/MA0793.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AMCTCARTAATRA
AGCTCATTAT---
 C G T A G T A C A G T C A C G T A G T C C G T A T C A G A C G T C G T A C T G A A C G T C T A G C G T A
C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T A C G T A C G T A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---AMCTCARTAATRA-
GCAACCTCATTATNNNN
 A C G T A C G T A C G T C G T A G T A C A G T C A C G T A G T C C G T A T C A G A C G T C G T A C T G A A C G T C T A G C G T A A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

PH0119.1_Nkx6-1_2/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AMCTCARTAATRA--
GANGTAATTAATTANN
 A C G T C G T A G T A C A G T C A C G T A G T C C G T A T C A G A C G T C G T A C T G A A C G T C T A G C G T A A C G T A C G T
T C A G C T G A T G C A T C A G G A C T T G C A C G T A C G A T G A C T C T G A G C T A C G A T C G A T C T G A A G T C A G C T

PH0019.1_Dbx2/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AMCTCARTAATRA--
NAATTAATTAATTNNN
 A C G T C G T A G T A C A G T C A C G T A G T C C G T A T C A G A C G T C G T A C T G A A C G T C T A G C G T A A C G T A C G T
C A T G C G T A T G C A G C A T G A C T G T C A G C T A G A C T G C A T C T G A C G T A G C A T C A G T C T G A G T C A T C G A

PH0146.1_Pou3f1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AMCTCARTAATRA---
NANTTAATTAATTANNN
 A C G T C G T A G T A C A G T C A C G T A G T C C G T A T C A G A C G T C G T A C T G A A C G T C T A G C G T A A C G T A C G T A C G T
C A T G G C T A T G C A A G C T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G T C A T C G A A C G T G A C T

HOXA5/MA0158.1/Jaspar

Match Rank:8
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AMCTCARTAATRA
----CACTAATT-
 C G T A G T A C A G T C A C G T A G T C C G T A T C A G A C G T C G T A C T G A A C G T C T A G C G T A
A C G T A C G T A C G T A C G T G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AMCTCARTAATRA
AAAAAATCAATAAT--
 A C G T A C G T A C G T C G T A G T A C A G T C A C G T A G T C C G T A T C A G A C G T C G T A C T G A A C G T C T A G C G T A
T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T A C G T A C G T

EMX1/MA0612.1/Jaspar

Match Rank:10
Score:0.60
Offset:5
Orientation:forward strand
Alignment:AMCTCARTAATRA--
-----CCTAATTACC
 C G T A G T A C A G T C A C G T A G T C C G T A T C A G A C G T C G T A C T G A A C G T C T A G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C A G T C G A C T T C G A C G T A C G A T C A G T C T G A T A G C A G T C