Information for 13-SAATGTGACAAATWCT (Motif 22)

A T G C C G T A C G T A A C G T A C T G A C G T A C T G C T G A A T G C G T C A G T C A C T G A G A C T C G A T A T G C A C G T
Reverse Opposite:
C G T A A T C G C G T A C G T A A G C T A C G T A C G T T A C G A G C T G T A C C G T A A G T C G T C A G A C T C G A T T A C G
p-value:1e-9
log p-value:-2.256e+01
Information Content per bp:1.728
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.8 +/- 18.6bp
Average Position of motif in Background71.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:SAATGTGACAAATWCT
--AGGTGTGAAM----
 A T G C C G T A C G T A A C G T A C T G A C G T A C T G C T G A A T G C G T C A G T C A C T G A G A C T C G A T A T G C A C G T
A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:SAATGTGACAAATWCT
-AAGGTGTGAAA----
 A T G C C G T A C G T A A C G T A C T G A C G T A C T G C T G A A T G C G T C A G T C A C T G A G A C T C G A T A T G C A C G T
A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T A C G T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--SAATGTGACAAATWCT
GAAAAGGTGTGAAAATT-
 A C G T A C G T A T G C C G T A C G T A A C G T A C T G A C G T A C T G C T G A A T G C G T C A G T C A C T G A G A C T C G A T A T G C A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:SAATGTGACAAATWCT
-ACCGTGACTAATTNN
 A T G C C G T A C G T A A C G T A C T G A C G T A C T G C T G A A T G C G T C A G T C A C T G A G A C T C G A T A T G C A C G T
A C G T C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

EOMES/MA0800.1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:SAATGTGACAAATWCT
-AAGGTGTGAAAAT--
 A T G C C G T A C G T A A C G T A C T G A C G T A C T G C T G A A T G C G T C A G T C A C T G A G A C T C G A T A T G C A C G T
A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:SAATGTGACAAATWCT
-AAGGTGTKAA-----
 A T G C C G T A C G T A A C G T A C T G A C G T A C T G C T G A A T G C G T C A G T C A C T G A G A C T C G A T A T G C A C G T
A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:SAATGTGACAAATWCT
--AGGTGTGAAA----
 A T G C C G T A C G T A A C G T A C T G A C G T A C T G C T G A A T G C G T C A G T C A C T G A G A C T C G A T A T G C A C G T
A C G T A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:SAATGTGACAAATWCT
--AGGTGTTAAT----
 A T G C C G T A C G T A A C G T A C T G A C G T A C T G C T G A A T G C G T C A G T C A C T G A G A C T C G A T A T G C A C G T
A C G T A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:SAATGTGACAAATWCT
-AAGGTGTGAA-----
 A T G C C G T A C G T A A C G T A C T G A C G T A C T G C T G A A T G C G T C A G T C A C T G A G A C T C G A T A T G C A C G T
A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:SAATGTGACAAATWCT
---CSTGGGAAAD---
 A T G C C G T A C G T A A C G T A C T G A C G T A C T G C T G A A T G C G T C A G T C A C T G A G A C T C G A T A T G C A C G T
A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T