Information for 3-CTAACATGGT (Motif 18)

A T G C G A C T T C G A T C G A G A T C C G T A C A G T A T C G A T C G C G A T
Reverse Opposite:
G C T A T A G C T A G C G T C A G C A T C A T G A G C T A G C T C T G A T A C G
p-value:1e-10
log p-value:-2.405e+01
Information Content per bp:1.655
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif6.80%
Number of Background Sequences with motif1030.8
Percentage of Background Sequences with motif2.20%
Average Position of motif in Targets52.1 +/- 27.2bp
Average Position of motif in Background50.3 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTAACATGGT---
-CAAGATGGCGGC
 A T G C G A C T T C G A T C G A G A T C C G T A C A G T A T C G A T C G C G A T A C G T A C G T A C G T
A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTAACATGGT-
CCATATATGGNA
 A C G T A T G C G A C T T C G A T C G A G A T C C G T A C A G T A T C G A T C G C G A T A C G T
A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A

PH0085.1_Irx4/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTAACATGGT----
NNTTTTACATGTANNNT
 A C G T A C G T A C G T A T G C G A C T T C G A T C G A G A T C C G T A C A G T A T C G A T C G C G A T A C G T A C G T A C G T A C G T
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

PB0078.1_Srf_1/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTAACATGGT-
TNCCATATATGGNA
 A C G T A C G T A C G T A T G C G A C T T C G A T C G A G A T C C G T A C A G T A T C G A T C G C G A T A C G T
C A G T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A C G A T C T A G C A T G C G T A C G T A

HLTF/MA0109.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTAACATGGT-
-NNATAAGGNN
 A T G C G A C T T C G A T C G A G A T C C G T A C A G T A T C G A T C G C G A T A C G T
A C G T C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T

PH0086.1_Irx5/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTAACATGGT----
ANTNNTACATGTANNTN
 A C G T A C G T A C G T A T G C G A C T T C G A T C G A G A T C C G T A C A G T A T C G A T C G C G A T A C G T A C G T A C G T A C G T
G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T

SOX21/MA0866.1/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CTAACATGGT-
AACACTACCATTGTT
 A C G T A C G T A C G T A C G T A T G C G A C T T C G A T C G A G A T C C G T A C A G T A T C G A T C G C G A T A C G T
T C G A G T C A G A T C G C T A G T A C A G C T C T G A G T A C G T A C G T C A A G C T A G C T T A C G A G C T G A C T

MF0008.1_MADS_class/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTAACATGGT
CCATATATGG-
 A C G T A T G C G A C T T C G A T C G A G A T C C G T A C A G T A T C G A T C G C G A T
G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G A C G T

USF2/MA0526.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTAACATGGT
GGTCACATGAC
 A C G T A T G C G A C T T C G A T C G A G A T C C G T A C A G T A T C G A T C G C G A T
C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C

Arid5a/MA0602.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTAACATGGT----
CTAATATTGCTAAA
 A T G C G A C T T C G A T C G A G A T C C G T A C A G T A T C G A T C G C G A T A C G T A C G T A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A