Information for 7-TRGCRCCCTCWSC (Motif 16)

A C G T C T A G C T A G A G T C C T G A T A G C A T G C A G T C A C G T A G T C C G A T A T C G A G T C
Reverse Opposite:
A C T G A T G C C G T A A C T G C G T A A C T G A T C G A C T G A G C T C T A G A G T C A G T C C G T A
p-value:1e-11
log p-value:-2.548e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.3 +/- 27.3bp
Average Position of motif in Background70.9 +/- 10.8bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TRGCRCCCTCWSC----
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T C T A G C T A G A G T C C T G A T A G C A T G C A G T C A C G T A G T C C G A T A T C G A G T C A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TRGCRCCCTCWSC
-GGCGCGCT----
 A C G T C T A G C T A G A G T C C T G A T A G C A T G C A G T C A C G T A G T C C G A T A T C G A G T C
A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TRGCRCCCTCWSC
TGGGGCCCAC---
 A C G T C T A G C T A G A G T C C T G A T A G C A T G C A G T C A C G T A G T C C G A T A T C G A G T C
G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TRGCRCCCTCWSC
NNNGGGGCGCCCCCNN-
 A C G T A C G T A C G T A C G T A C G T C T A G C T A G A G T C C T G A T A G C A T G C A G T C A C G T A G T C C G A T A T C G A G T C
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TRGCRCCCTCWSC
---CRCCCACGCA
 A C G T C T A G C T A G A G T C C T G A T A G C A T G C A G T C A C G T A G T C C G A T A T C G A G T C
A C G T A C G T A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A

CTCF/MA0139.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TRGCRCCCTCWSC------
TAGCGCCCCCTGGTGGCCA
 A C G T C T A G C T A G A G T C C T G A T A G C A T G C A G T C A C G T A G T C C G A T A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0112.1_E2F2_2/Jaspar

Match Rank:7
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TRGCRCCCTCWSC
NNNNTTGGCGCCGANNN-
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T A G A G T C C T G A T A G C A T G C A G T C A C G T A G T C C G A T A T C G A G T C
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TRGCRCCCTCWSC
-YCCGCCCACGCN
 A C G T C T A G C T A G A G T C C T G A T A G C A T G C A G T C A C G T A G T C C G A T A T C G A G T C
A C G T G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A

PB0113.1_E2F3_2/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TRGCRCCCTCWSC
NNNNTTGGCGCCGANNN-
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T A G A G T C C T G A T A G C A T G C A G T C A C G T A G T C C G A T A T C G A G T C
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T A C G T

E2F1/MA0024.3/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TRGCRCCCTCWSC
TTTGGCGCCAAA---
 A C G T A C G T A C G T C T A G C T A G A G T C C T G A T A G C A T G C A G T C A C G T A G T C C G A T A T C G A G T C
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A A C G T A C G T A C G T