Information for 5-CKCTMCKGCCMTC (Motif 13)

A G T C A C G T A T G C A C G T T G A C A G T C C A G T A C T G A G T C A G T C G T A C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C T G A C T G A G T C G T C A A C T G A C T G C G T A A T C G G T C A A C T G
p-value:1e-12
log p-value:-2.803e+01
Information Content per bp:1.875
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif8.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.4 +/- 31.0bp
Average Position of motif in Background44.4 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CKCTMCKGCCMTC-
-----CTGCCCGCA
 A G T C A C G T A T G C A C G T T G A C A G T C C A G T A C T G A G T C A G T C G T A C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

E2F4/MA0470.1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CKCTMCKGCCMTC
NNTTCCCGCCC--
 A G T C A C G T A T G C A C G T T G A C A G T C C A G T A C T G A G T C A G T C G T A C A C G T A G T C
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CKCTMCKGCCMTC
NCTTCCCGCCC--
 A G T C A C G T A T G C A C G T T G A C A G T C C A G T A C T G A G T C A G T C G T A C A C G T A G T C
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CKCTMCKGCCMTC
-GGTCCCGCCC--
 A G T C A C G T A T G C A C G T T G A C A G T C C A G T A C T G A G T C A G T C G T A C A C G T A G T C
A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CKCTMCKGCCMTC
-TTTCCCGCCMAV
 A G T C A C G T A T G C A C G T T G A C A G T C C A G T A C T G A G T C A G T C G T A C A C G T A G T C
A C G T C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CKCTMCKGCCMTC
-GCTCCGCCCMCY
 A G T C A C G T A T G C A C G T T G A C A G T C C A G T A C T G A G T C A G T C G T A C A C G T A G T C
A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CKCTMCKGCCMTC
NYTTCCCGCC---
 A G T C A C G T A T G C A C G T T G A C A G T C C A G T A C T G A G T C A G T C G T A C A C G T A G T C
T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CKCTMCKGCCMTC---
----GCCGCCATCTTG
 A G T C A C G T A T G C A C G T T G A C A G T C C A G T A C T G A G T C A G T C G T A C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

YY1/MA0095.2/Jaspar

Match Rank:9
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CKCTMCKGCCMTC---
----GCNGCCATCTTG
 A G T C A C G T A T G C A C G T T G A C A G T C C A G T A C T G A G T C A G T C G T A C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

PB0202.1_Zfp410_2/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CKCTMCKGCCMTC---
TCACCCCGCCCCAAATT
 A C G T A G T C A C G T A T G C A C G T T G A C A G T C C A G T A C T G A G T C A G T C G T A C A C G T A G T C A C G T A C G T A C G T
A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T