Information for 3-GGGACTTTCC (Motif 8)

A T C G A C T G T A C G G C T A T G A C G C A T C A G T C G A T A T G C G A T C
Reverse Opposite:
C T A G T A C G G C T A G T C A C G T A A C T G C G A T A T G C T G A C T A G C
p-value:1e-10
log p-value:-2.469e+01
Information Content per bp:1.648
Number of Target Sequences with motif75.0
Percentage of Target Sequences with motif8.72%
Number of Background Sequences with motif1770.7
Percentage of Background Sequences with motif3.71%
Average Position of motif in Targets50.4 +/- 27.0bp
Average Position of motif in Background50.3 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RELA/MA0107.1/Jaspar

Match Rank:1
Score:0.90
Offset:0
Orientation:forward strand
Alignment:GGGACTTTCC
GGGAATTTCC
 A T C G A C T G T A C G G C T A T G A C G C A T C A G T C G A T A T G C G A T C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:GGGACTTTCC
GGGAATTTCC
 A T C G A C T G T A C G G C T A T G A C G C A T C A G T C G A T A T G C G A T C
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.86
Offset:0
Orientation:forward strand
Alignment:GGGACTTTCC
GGGGATTTCC
 A T C G A C T G T A C G G C T A T G A C G C A T C A G T C G A T A T G C G A T C
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.85
Offset:0
Orientation:forward strand
Alignment:GGGACTTTCC
GGGGATTTCC
 A T C G A C T G T A C G G C T A T G A C G C A T C A G T C G A T A T G C G A T C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-GGGACTTTCC-
NGGGGATTTCCC
 A C G T A T C G A C T G T A C G G C T A T G A C G C A T C A G T C G A T A T G C G A T C A C G T
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

NFATC1/MA0624.1/Jaspar

Match Rank:6
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GGGACTTTCC---
---ATTTTCCATT
 A T C G A C T G T A C G G C T A T G A C G C A T C A G T C G A T A T G C G A T C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

NFATC3/MA0625.1/Jaspar

Match Rank:7
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GGGACTTTCC---
---ATTTTCCATT
 A T C G A C T G T A C G G C T A T G A C G C A T C A G T C G A T A T G C G A T C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GGGACTTTCC--
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A C G T A T C G A C T G T A C G G C T A T G A C G C A T C A G T C G A T A T G C G A T C A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:9
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GGGACTTTCC---
---ATTTTCCATT
 A T C G A C T G T A C G G C T A T G A C G C A T C A G T C G A T A T G C G A T C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGGACTTTCC--
GGGGATTCCCCC
 A T C G A C T G T A C G G C T A T G A C G C A T C A G T C G A T A T G C G A T C A C G T A C G T
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C