Information for 11-AAATAGATATTTT (Motif 17)

C G T A C G T A C G T A C G A T C G T A A C T G G T C A A C G T C G T A C G A T A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A C G T A A C G T C G T A A C G T G T A C A C G T C G T A A C G T A C G T C G A T
p-value:1e-8
log p-value:-1.926e+01
Information Content per bp:1.920
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.3 +/- 26.4bp
Average Position of motif in Background27.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ONECUT1/MA0679.1/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AAATAGATATTTT
AAAAAATCGATAAT--
 A C G T A C G T A C G T C G T A C G T A C G T A C G A T C G T A A C T G G T C A A C G T C G T A C G A T A C G T A C G T A C G T
T G C A C T G A C G T A G C T A C T G A C T G A A C G T A G T C C T A G C G T A G A C T C G T A G C T A G A C T A C G T A C G T

ONECUT2/MA0756.1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AAATAGATATTTT
AAAAAATCGATAAT--
 A C G T A C G T A C G T C G T A C G T A C G T A C G A T C G T A A C T G G T C A A C G T C G T A C G A T A C G T A C G T A C G T
T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:AAATAGATATTTT----
-----KCTATTTTTRGH
 C G T A C G T A C G T A C G A T C G T A A C T G G T C A A C G T C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:4
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:AAATAGATATTTT------
----TTCTATTTTTAGNNN
 C G T A C G T A C G T A C G A T C G T A A C T G G T C A A C G T C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AAATAGATATTTT
--AAGGATATNTN
 C G T A C G T A C G T A C G A T C G T A A C T G G T C A A C G T C G T A C G A T A C G T A C G T A C G T
A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

PB0126.1_Gata5_2/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AAATAGATATTTT----
NNNCTGATATCTCNNNN
 C G T A C G T A C G T A C G A T C G T A A C T G G T C A A C G T C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:7
Score:0.59
Offset:5
Orientation:forward strand
Alignment:AAATAGATATTTT----
-----GCTATTTTTAGC
 C G T A C G T A C G T A C G A T C G T A A C T G G T C A A C G T C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

ONECUT3/MA0757.1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AAATAGATATTTT
AAAAAATCAATAAT--
 A C G T A C G T A C G T C G T A C G T A C G T A C G A T C G T A A C T G G T C A A C G T C G T A C G A T A C G T A C G T A C G T
T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AAATAGATATTTT
CCAAAAATAG-------
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G A T C G T A A C T G G T C A A C G T C G T A C G A T A C G T A C G T A C G T
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:10
Score:0.58
Offset:5
Orientation:forward strand
Alignment:AAATAGATATTTT----
-----GCTATTTTTGGM
 C G T A C G T A C G T A C G A T C G T A A C T G G T C A A C G T C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C