Information for 9-AAARYAMYWGCAW (Motif 15)

T C G A C G T A C G T A C T G A G A T C C G T A G T C A A G T C C G A T A T C G A G T C C G T A C G T A
Reverse Opposite:
C G A T A C G T A C T G A T G C C G T A T C A G C A G T A C G T C T A G G A C T A C G T A C G T A G C T
p-value:1e-8
log p-value:-1.993e+01
Information Content per bp:1.798
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif18.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets52.8 +/- 27.3bp
Average Position of motif in Background51.7 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAARYAMYWGCAW--
GAAAAAATTGCAAGG
 T C G A C G T A C G T A C T G A G A T C C G T A G T C A A G T C C G A T A T C G A G T C C G T A C G T A A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------AAARYAMYWGCAW-
NTNATGCAAYMNNHTGMAAY
 A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A C G T A C T G A G A T C C G T A G T C A A G T C C G A T A T C G A G T C C G T A C G T A A C G T
T G C A G C A T C G A T C G T A C A G T A C T G G T A C C G T A C T G A A G C T G T C A A C T G C T A G G T C A C G A T A C T G G T A C T G C A C G T A A G C T

Gfi1b/MA0483.1/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AAARYAMYWGCAW
-AAATCACAGCA-
 T C G A C G T A C G T A C T G A G A T C C G T A G T C A A G T C C G A T A T C G A G T C C G T A C G T A
A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T

GCM1/MA0646.1/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AAARYAMYWGCAW-
---GTACCCGCATN
 T C G A C G T A C G T A C T G A G A T C C G T A G T C A A G T C C G A T A T C G A G T C C G T A C G T A A C G T
A C G T A C G T A C G T T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G

PB0123.1_Foxl1_2/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----AAARYAMYWGCAW
ATATCAAAACAAAACA--
 A C G T A C G T A C G T A C G T A C G T T C G A C G T A C G T A C T G A G A T C C G T A G T C A A G T C C G A T A T C G A G T C C G T A C G T A
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A A C G T A C G T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AAARYAMYWGCAW-------
GAAGTANCACGAATNMRAGT
 T C G A C G T A C G T A C T G A G A T C C G T A G T C A A G T C C G A T A T C G A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C T G A C T A G G A C T C T G A T A C G A G T C G C T A G A T C C T A G T C G A T G C A G A C T A C G T G T C A T C A G C T G A C A T G G A C T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.54
Offset:5
Orientation:forward strand
Alignment:AAARYAMYWGCAW--
-----ATTTGCATAA
 T C G A C G T A C G T A C T G A G A T C C G T A G T C A A G T C C G A T A T C G A G T C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

PB0024.1_Gcm1_1/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AAARYAMYWGCAW----
-TCGTACCCGCATCATT
 T C G A C G T A C G T A C T G A G A T C C G T A G T C A A G T C C G A T A T C G A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

TCF3/MA0522.2/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AAARYAMYWGCAW
--AACACCTGCT-
 T C G A C G T A C G T A C T G A G A T C C G T A G T C A A G T C C G A T A T C G A G T C C G T A C G T A
A C G T A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:10
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:AAARYAMYWGCAW-
-----ATTTGCATA
 T C G A C G T A C G T A C T G A G A T C C G T A G T C A A G T C C G A T A T C G A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A