Information for 7-AAKAGCMMASAGG (Motif 12)

C G T A G T C A A C G T C G T A A C T G A G T C G T A C G T A C C G T A A T C G C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A T G C A C G T C A T G A C T G A C T G A G T C A C G T T G C A A C G T A C G T
p-value:1e-9
log p-value:-2.244e+01
Information Content per bp:1.872
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.5 +/- 21.5bp
Average Position of motif in Background51.0 +/- 12.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:1
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AAKAGCMMASAGG---
--NTGCCCANNGGTNA
 C G T A G T C A A C G T C G T A A C T G A G T C G T A C G T A C C G T A A T C G C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AAKAGCMMASAGG---
--TAGGGCAAAGGTCA
 C G T A G T C A A C G T C G T A A C T G A G T C G T A C G T A C C G T A A T C G C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:3
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AAKAGCMMASAGG
-WAAGTAAAYA--
 C G T A G T C A A C G T C G T A A C T G A G T C G T A C G T A C C G T A A T C G C G T A A C T G A C T G
A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AAKAGCMMASAGG
--CAGCC------
 C G T A G T C A A C G T C G T A A C T G A G T C G T A C G T A C C G T A A T C G C G T A A C T G A C T G
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----AAKAGCMMASAGG
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T C G T A G T C A A C G T C G T A A C T G A G T C G T A C G T A C C G T A A T C G C G T A A C T G A C T G
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

Tcf7/MA0769.1/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AAKAGCMMASAGG
AAAGATCAAAGG--
 A C G T C G T A G T C A A C G T C G T A A C T G A G T C G T A C G T A C C G T A A T C G C G T A A C T G A C T G
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AAKAGCMMASAGG---
AGCGGCACACACGCAA
 C G T A G T C A A C G T C G T A A C T G A G T C G T A C G T A C C G T A A T C G C G T A A C T G A C T G A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0119.1_Foxa2_2/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AAKAGCMMASAGG
AAAAATAACAAACGG-
 A C G T A C G T A C G T C G T A G T C A A C G T C G T A A C T G A G T C G T A C G T A C C G T A A T C G C G T A A C T G A C T G
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G A C G T

LEF1/MA0768.1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AAKAGCMMASAGG-
AAAGATCAAAGGGTT
 A C G T C G T A G T C A A C G T C G T A A C T G A G T C G T A C G T A C C G T A A T C G C G T A A C T G A C T G A C G T
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:AAKAGCMMASAGG
-TATGTAAACANG
 C G T A G T C A A C G T C G T A A C T G A G T C G T A C G T A C C G T A A T C G C G T A A C T G A C T G
A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G