p-value: | 1e-11 |
log p-value: | -2.657e+01 |
Information Content per bp: | 1.728 |
Number of Target Sequences with motif | 23.0 |
Percentage of Target Sequences with motif | 2.75% |
Number of Background Sequences with motif | 202.0 |
Percentage of Background Sequences with motif | 0.42% |
Average Position of motif in Targets | 42.0 +/- 26.5bp |
Average Position of motif in Background | 48.7 +/- 27.6bp |
Strand Bias (log2 ratio + to - strand density) | -0.4 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0166.1_Sox12_2/Jaspar
Match Rank: | 1 |
Score: | 0.87 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TCCTTTSTMT---- ANTCCTTTGTCTNNNN |
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Sox3/MA0514.1/Jaspar
Match Rank: | 2 |
Score: | 0.80 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TCCTTTSTMT- -CCTTTGTTTT |
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Sox2/MA0143.3/Jaspar
Match Rank: | 3 |
Score: | 0.74 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TCCTTTSTMT -CCTTTGTT- |
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Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer
Match Rank: | 4 |
Score: | 0.73 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TCCTTTSTMT -CCWTTGTY- |
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PB0137.1_Irf3_2/Jaspar
Match Rank: | 5 |
Score: | 0.69 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TCCTTTSTMT NNGCACCTTTCTCC |
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Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer
Match Rank: | 6 |
Score: | 0.69 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TCCTTTSTMT NCCATTGTTY |
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Sox6/MA0515.1/Jaspar
Match Rank: | 7 |
Score: | 0.69 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TCCTTTSTMT- -CCATTGTTTT |
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PB0061.1_Sox11_1/Jaspar
Match Rank: | 8 |
Score: | 0.68 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TCCTTTSTMT---- NNNTCCTTTGTTCTNNN |
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PB0071.1_Sox4_1/Jaspar
Match Rank: | 9 |
Score: | 0.68 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TCCTTTSTMT---- TNNTCCTTTGTTCTNNT |
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Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer
Match Rank: | 10 |
Score: | 0.68 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TCCTTTSTMT- -CCWTTGTYYB |
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