Information for 4-CCCTGTCGGA (Motif 7)

A G T C G T A C A G T C A G C T A C T G A G C T A T G C C A T G A C T G C T G A
Reverse Opposite:
A G C T A G T C G T A C A T C G C T G A A G T C C T G A A C T G C A T G A C T G
p-value:1e-11
log p-value:-2.748e+01
Information Content per bp:1.856
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.03%
Number of Background Sequences with motif91.9
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets51.5 +/- 23.5bp
Average Position of motif in Background50.7 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CCCTGTCGGA
-GCTGTG---
 A G T C G T A C A G T C A G C T A C T G A G C T A T G C C A T G A C T G C T G A
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCCTGTCGGA
--CTGTCTGG
 A G T C G T A C A G T C A G C T A C T G A G C T A T G C C A T G A C T G C T G A
A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCCTGTCGGA
-GCTGTCAA-
 A G T C G T A C A G T C A G C T A C T G A G C T A T G C C A T G A C T G C T G A
A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCCTGTCGGA
--NTGTCAN-
 A G T C G T A C A G T C A G C T A C T G A G C T A T G C C A T G A C T G C T G A
A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGTCGGA-----
NNTNNTGTCTGGNNTNG
 A C G T A C G T A G T C G T A C A G T C A G C T A C T G A G C T A T G C C A T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCCTGTCGGA
VBSYGTCTGG
 A G T C G T A C A G T C A G C T A C T G A G C T A T G C C A T G A C T G C T G A
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

MEIS3/MA0775.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CCCTGTCGGA
-CCTGTCAA-
 A G T C G T A C A G T C A G C T A C T G A G C T A T G C C A T G A C T G C T G A
A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CCCTGTCGGA--
CAATCACTGGCAGAAT
 A C G T A C G T A C G T A C G T A G T C G T A C A G T C A G C T A C T G A G C T A T G C C A T G A C T G C T G A A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CCCTGTCGGA----
DCHCAGCAGGRGGCC
 A C G T A G T C G T A C A G T C A G C T A C T G A G C T A T G C C A T G A C T G C T G A A C G T A C G T A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CCCTGTCGGA
--YTGWCADY
 A G T C G T A C A G T C A G C T A C T G A G C T A T G C C A T G A C T G C T G A
A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C