Information for 10-GGCAGCCAAT (Motif 19)

T A C G A T C G G T A C C G T A A T C G A G T C A G T C C T G A C G T A G C A T
Reverse Opposite:
C G T A C G A T A G C T A C T G T C A G A T G C G C A T A C T G A T G C A T G C
p-value:1e-9
log p-value:-2.163e+01
Information Content per bp:1.827
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.39%
Number of Background Sequences with motif193.9
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets44.6 +/- 24.4bp
Average Position of motif in Background54.6 +/- 32.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.73
Offset:3
Orientation:forward strand
Alignment:GGCAGCCAAT---
---AGCCAATCGG
 T A C G A T C G G T A C C G T A A T C G A G T C A G T C C T G A C G T A G C A T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GGCAGCCAAT--
ACTAGCCAATCA
 T A C G A T C G G T A C C G T A A T C G A G T C A G T C C T G A C G T A G C A T A C G T A C G T
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GGCAGCCAAT
---TGCCAA-
 T A C G A T C G G T A C C G T A A T C G A G T C A G T C C T G A C G T A G C A T
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GGCAGCCAAT
-BCAGACWA-
 T A C G A T C G G T A C C G T A A T C G A G T C A G T C C T G A C G T A G C A T
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GGCAGCCAAT
-CGTGCCAAG
 T A C G A T C G G T A C C G T A A T C G A G T C A G T C C T G A C G T A G C A T
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFYB/MA0502.1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGCAGCCAAT---
AAATGGACCAATCAG
 A C G T A C G T T A C G A T C G G T A C C G T A A T C G A G T C A G T C C T G A C G T A G C A T A C G T A C G T A C G T
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGCAGCCAAT---
AGGGAAGTCATTTCT
 A C G T A C G T T A C G A T C G G T A C C G T A A T C G A G T C A G T C C T G A C G T A G C A T A C G T A C G T A C G T
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGCAGCCAAT-
-GGTGCCAAGT
 T A C G A T C G G T A C C G T A A T C G A G T C A G T C C T G A C G T A G C A T A C G T
A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

Sox17/MA0078.1/Jaspar

Match Rank:9
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GGCAGCCAAT---
----GACAATGNN
 T A C G A T C G G T A C C G T A A T C G A G T C A G T C C T G A C G T A G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GGCAGCCAAT
TNNGGGCAG-----
 A C G T A C G T A C G T A C G T T A C G A T C G G T A C C G T A A T C G A G T C A G T C C T G A C G T A G C A T
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T