Information for 5-CATGTGGGAAAAC (Motif 6)

A G T C C G T A A C G T A C T G A C G T A C T G A C T G A C T G C G T A C G T A C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C G T A C G T A G T C A G T C A G T C C G T A A G T C C G T A A C G T A C T G
p-value:1e-11
log p-value:-2.699e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.75%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.9 +/- 37.2bp
Average Position of motif in Background38.9 +/- 12.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:CATGTGGGAAAAC
--CSTGGGAAAD-
 A G T C C G T A A C G T A C T G A C G T A C T G A C T G A C T G C G T A C G T A C G T A C G T A A G T C
A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T

TBR1/MA0802.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CATGTGGGAAAAC
-AGGTGTGAAA--
 A G T C C G T A A C G T A C T G A C G T A C T G A C T G A C T G C G T A C G T A C G T A C G T A A G T C
A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:3
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:CATGTGGGAAAAC
-----TGGAAAA-
 A G T C C G T A A C G T A C T G A C G T A C T G A C T G A C T G C G T A C G T A C G T A C G T A A G T C
A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T

EOMES/MA0800.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CATGTGGGAAAAC
AAGGTGTGAAAAT
 A G T C C G T A A C G T A C T G A C G T A C T G A C T G A C T G C G T A C G T A C G T A C G T A A G T C
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

PB0013.1_Eomes_1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CATGTGGGAAAAC-
GAAAAGGTGTGAAAATT
 A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C T G A C T G A C T G C G T A C G T A C G T A C G T A A G T C A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CATGTGGGAAAAC
-AGGTGTGAAM--
 A G T C C G T A A C G T A C T G A C G T A C T G A C T G A C T G C G T A C G T A C G T A C G T A A G T C
A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CATGTGGGAAAAC
CACGTGGC-----
 A G T C C G T A A C G T A C T G A C G T A C T G A C T G A C T G C G T A C G T A C G T A C G T A A G T C
A G T C C G T A A G T C A C T G A C G T A C T G A T C G G A T C A C G T A C G T A C G T A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CATGTGGGAAAAC
ATCCACAGGTGCGAAAA-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C T G A C T G A C T G C G T A C G T A C G T A C G T A A G T C
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A A C G T

GCM2/MA0767.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CATGTGGGAAAAC
TATGCGGGTA---
 A G T C C G T A A C G T A C T G A C G T A C T G A C T G A C T G C G T A C G T A C G T A C G T A A G T C
A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CATGTGGGAAAAC
--NATGGAAAAN-
 A G T C C G T A A C G T A C T G A C G T A C T G A C T G A C T G C G T A C G T A C G T A C G T A A G T C
A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T