Information for 1-TGCTGCAGGTTCC (Motif 3)

G A C T A C T G G T A C A C G T A C T G A G T C C T G A A C T G A C T G A G C T A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A T C G A A G T C A G T C A G C T A C T G G T A C G T C A A C T G G T A C C T G A
p-value:1e-18
log p-value:-4.171e+01
Information Content per bp:1.807
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif4.56%
Number of Background Sequences with motif40.0
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets42.2 +/- 15.1bp
Average Position of motif in Background52.0 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGCTGCAGGTTCC-
--SDGCAGGTGCNS
 G A C T A C T G G T A C A C G T A C T G A G T C C T G A A C T G A C T G A G C T A C G T A G T C A G T C A C G T
A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

SNAI2/MA0745.1/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TGCTGCAGGTTCC
---AACAGGTGT-
 G A C T A C T G G T A C A C G T A C T G A G T C C T G A A C T G A C T G A G C T A C G T A G T C A G T C
A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T

HES7/MA0822.1/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TGCTGCAGGTTCC-
--TGGCACGTGCCA
 G A C T A C T G G T A C A C G T A C T G A G T C C T G A A C T G A C T G A G C T A C G T A G T C A G T C A C G T
A C G T A C G T G A C T T C A G T C A G G A T C T C G A A G T C C T A G G A C T T C A G G A T C A G T C C T G A

HES5/MA0821.1/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TGCTGCAGGTTCC-
--CGGCACGTGCCA
 G A C T A C T G G T A C A C G T A C T G A G T C C T G A A C T G A C T G A G C T A C G T A G T C A G T C A C G T
A C G T A C G T G A T C T C A G T C A G A G T C C T G A G A T C C T A G A G C T A C T G A G T C A G T C C T G A

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.57
Offset:8
Orientation:forward strand
Alignment:TGCTGCAGGTTCC-
--------GCTCCG
 G A C T A C T G G T A C A C G T A C T G A G T C C T G A A C T G A C T G A G C T A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TGCTGCAGGTTCC-
--CAGCTGTTTCCT
 G A C T A C T G G T A C A C G T A C T G A G T C C T G A A C T G A C T G A G C T A C G T A G T C A G T C A C G T
A C G T A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGCTGCAGGTTCC-
DCHCAGCAGGRGGCC
 A C G T G A C T A C T G G T A C A C G T A C T G A G T C C T G A A C T G A C T G A G C T A C G T A G T C A G T C A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TGCTGCAGGTTCC
---NNCAGGTGNN
 G A C T A C T G G T A C A C G T A C T G A G T C C T G A A C T G A C T G A G C T A C G T A G T C A G T C
A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

ID4/MA0824.1/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TGCTGCAGGTTCC
---GACAGGTGTN
 G A C T A C T G G T A C A C G T A C T G A G T C C T G A A C T G A C T G A G C T A C G T A G T C A G T C
A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A

GCM1/MA0646.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TGCTGCAGGTTCC
-CATGCGGGTAC-
 G A C T A C T G G T A C A C G T A C T G A G T C C T G A A C T G A C T G A G C T A C G T A G T C A G T C
A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C A C G T