Information for 2-ATTTCCCACA (Motif 6)

C G T A A G C T A C G T A C G T A G T C G T A C A G T C C G T A A G T C C G T A
Reverse Opposite:
C G A T A C T G A C G T A C T G A C T G C T A G C G T A C G T A C T G A C G A T
p-value:1e-12
log p-value:-2.786e+01
Information Content per bp:1.889
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif10.98%
Number of Background Sequences with motif119.1
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets50.2 +/- 27.7bp
Average Position of motif in Background46.7 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.84
Offset:0
Orientation:forward strand
Alignment:ATTTCCCACA
HTTTCCCASG
 C G T A A G C T A C G T A C G T A G T C G T A C A G T C C G T A A G T C C G T A
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

NFAT5/MA0606.1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:ATTTCCCACA
ATTTTCCATT
 C G T A A G C T A C G T A C G T A G T C G T A C A G T C C G T A A G T C C G T A
C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

PB0013.1_Eomes_1/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--ATTTCCCACA-----
NNTTTTCACACCTTNNN
 A C G T A C G T C G T A A G C T A C G T A C G T A G T C G T A C A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:ATTTCCCACA
ATTTTCCATT
 C G T A A G C T A C G T A C G T A G T C G T A C A G T C C G T A A G T C C G T A
C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

TBR1/MA0802.1/Jaspar

Match Rank:5
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:ATTTCCCACA-
-TTTCACACCT
 C G T A A G C T A C G T A C G T A G T C G T A C A G T C C G T A A G T C C G T A A C G T
A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T

EOMES/MA0800.1/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-ATTTCCCACA--
NTTTTCACACCTT
 A C G T C G T A A G C T A C G T A C G T A G T C G T A C A G T C C G T A A G T C C G T A A C G T A C G T
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:ATTTCCCACA
NYTTCCCGCC
 C G T A A G C T A C G T A C G T A G T C G T A C A G T C C G T A A G T C C G T A
T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C

NFATC2/MA0152.1/Jaspar

Match Rank:8
Score:0.67
Offset:1
Orientation:forward strand
Alignment:ATTTCCCACA
-TTTTCCA--
 C G T A A G C T A C G T A C G T A G T C G T A C A G T C C G T A A G T C C G T A
A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ATTTCCCACA-
VDTTTCCCGCCA
 A C G T C G T A A G C T A C G T A C G T A G T C G T A C A G T C C G T A A G T C C G T A A C G T
T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:10
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:ATTTCCCACA--
--TTMACACCTT
 C G T A A G C T A C G T A C G T A G T C G T A C A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T