Information for 9-CAGAWGCAGSHCACRG (Motif 11)

T A G C G T C A A T C G G C T A C G A T C A T G G T A C C T G A A C T G A T G C G A T C T A G C C G T A A G T C C T G A A C T G
Reverse Opposite:
A G T C G A C T A C T G C G A T A C T G C A T G A T C G A G T C A G C T A C T G G A T C C G T A C A G T A T G C A C G T A T C G
p-value:1e-8
log p-value:-1.874e+01
Information Content per bp:1.712
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif8.54%
Number of Background Sequences with motif147.5
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets35.6 +/- 26.0bp
Average Position of motif in Background49.1 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.43
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CAGAWGCAGSHCACRG
AGAGRRACAGCWGAC--
 A C G T T A G C G T C A A T C G G C T A C G A T C A T G G T A C C T G A A C T G A T G C G A T C T A G C C G T A A G T C C T G A A C T G
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.53
Offset:11
Orientation:reverse strand
Alignment:CAGAWGCAGSHCACRG-
-----------CACAGN
 T A G C G T C A A T C G G C T A C G A T C A T G G T A C C T G A A C T G A T G C G A T C T A G C C G T A A G T C C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CAGAWGCAGSHCACRG
------AAGGTCAC--
 T A G C G T C A A T C G G C T A C G A T C A T G G T A C C T G A A C T G A T G C G A T C T A G C C G T A A G T C C T G A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CAGAWGCAGSHCACRG----
----AGCGGCACACACGCAA
 T A G C G T C A A T C G G C T A C G A T C A T G G T A C C T G A A C T G A T G C G A T C T A G C C G T A A G T C C T G A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

RORA/MA0071.1/Jaspar

Match Rank:5
Score:0.49
Offset:3
Orientation:forward strand
Alignment:CAGAWGCAGSHCACRG
---ATCAAGGTCA---
 T A G C G T C A A T C G G C T A C G A T C A T G G T A C C T G A A C T G A T G C G A T C T A G C C G T A A G T C C T G A A C T G
A C G T A C G T A C G T C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:6
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:CAGAWGCAGSHCACRG----
------CAGGCCNNGGCCNN
 T A G C G T C A A T C G G C T A C G A T C A T G G T A C C T G A A C T G A T G C G A T C T A G C C G T A A G T C C T G A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:7
Score:0.49
Offset:-4
Orientation:forward strand
Alignment:----CAGAWGCAGSHCACRG
RGGTCADNNAGAGGTCAV--
 A C G T A C G T A C G T A C G T T A G C G T C A A T C G G C T A C G A T C A T G G T A C C T G A A C T G A T G C G A T C T A G C C G T A A G T C C T G A A C T G
C T G A C A T G A C T G A C G T A T G C C G T A C A T G T A C G A T G C G C T A T A C G C T G A C T A G A C T G A C G T A T G C C G T A T A G C A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:8
Score:0.48
Offset:3
Orientation:forward strand
Alignment:CAGAWGCAGSHCACRG
---AAYTAGGTCA---
 T A G C G T C A A T C G G C T A C G A T C A T G G T A C C T G A A C T G A T G C G A T C T A G C C G T A A G T C C T G A A C T G
A C G T A C G T A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.47
Offset:7
Orientation:forward strand
Alignment:CAGAWGCAGSHCACRG
-------AGGTCA---
 T A G C G T C A A T C G G C T A C G A T C A T G G T A C C T G A A C T G A T G C G A T C T A G C C G T A A G T C C T G A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.47
Offset:5
Orientation:forward strand
Alignment:CAGAWGCAGSHCACRG
-----TRAGGTCA---
 T A G C G T C A A T C G G C T A C G A T C A T G G T A C C T G A A C T G A T G C G A T C T A G C C G T A A G T C C T G A A C T G
A C G T A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T