Information for 4-ACAGCGCCCC (Motif 2)

T C G A A T G C G T C A A C T G A T G C C A T G G T A C T G A C G T A C A G T C
Reverse Opposite:
T C A G C A T G A C T G C A T G G T A C T A C G T G A C C A G T T A C G A G C T
p-value:1e-34
log p-value:-7.942e+01
Information Content per bp:1.656
Number of Target Sequences with motif68.0
Percentage of Target Sequences with motif7.95%
Number of Background Sequences with motif539.3
Percentage of Background Sequences with motif1.13%
Average Position of motif in Targets56.8 +/- 24.7bp
Average Position of motif in Background50.3 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ACAGCGCCCC
AGCGCGCC--
 T C G A A T G C G T C A A C T G A T G C C A T G G T A C T G A C G T A C A G T C
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ACAGCGCCCC
CACAGN-----
 A C G T T C G A A T G C G T C A A C T G A T G C C A T G G T A C T G A C G T A C A G T C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:3
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------ACAGCGCCCC
TCNCTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A T G C G T C A A C T G A T G C C A T G G T A C T G A C G T A C A G T C
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

PB0039.1_Klf7_1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---ACAGCGCCCC---
TCGACCCCGCCCCTAT
 A C G T A C G T A C G T T C G A A T G C G T C A A C T G A T G C C A T G G T A C T G A C G T A C A G T C A C G T A C G T A C G T
G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T

Rhox11/MA0629.1/Jaspar

Match Rank:5
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------ACAGCGCCCC
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A T G C G T C A A C T G A T G C C A T G G T A C T G A C G T A C A G T C
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:6
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------ACAGCGCCCC
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A T G C G T C A A C T G A T G C C A T G G T A C T G A C G T A C A G T C
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PB0008.1_E2F2_1/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ACAGCGCCCC--
ATAAAGGCGCGCGAT
 A C G T A C G T A C G T T C G A A T G C G T C A A C T G A T G C C A T G G T A C T G A C G T A C A G T C A C G T A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

PB0009.1_E2F3_1/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ACAGCGCCCC--
ATAAGGGCGCGCGAT
 A C G T A C G T A C G T T C G A A T G C G T C A A C T G A T G C C A T G G T A C T G A C G T A C A G T C A C G T A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

PB0202.1_Zfp410_2/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ACAGCGCCCC-----
TCACCCCGCCCCAAATT
 A C G T A C G T T C G A A T G C G T C A A C T G A T G C C A T G G T A C T G A C G T A C A G T C A C G T A C G T A C G T A C G T A C G T
A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T

PB0052.1_Plagl1_1/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ACAGCGCCCC---
TTGGGGGCGCCCCTAG
 A C G T A C G T A C G T T C G A A T G C G T C A A C T G A T G C C A T G G T A C T G A C G T A C A G T C A C G T A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G