Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 857)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 47508)	% of Background Sequences with Motif
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e-664	-1.530e+03	0.0000	412.0	48.07%	280.3	0.59%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e-558	-1.287e+03	0.0000	414.0	48.31%	519.0	1.09%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e-13	-3.157e+01	0.0000	12.0	1.40%	22.9	0.05%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e-12	-2.768e+01	0.0000	88.0	10.27%	2131.6	4.47%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e-11	-2.557e+01	0.0000	80.0	9.33%	1923.0	4.03%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e-9	-2.140e+01	0.0000	196.0	22.87%	7122.4	14.93%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e-8	-1.856e+01	0.0000	65.0	7.58%	1664.1	3.49%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e-6	-1.464e+01	0.0000	126.0	14.70%	4487.0	9.40%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e-5	-1.349e+01	0.0001	314.0	36.64%	13910.2	29.15%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e-5	-1.224e+01	0.0002	135.0	15.75%	5128.4	10.75%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e-4	-1.057e+01	0.0008	134.0	15.64%	5261.8	11.03%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e-4	-9.788e+00	0.0017	98.0	11.44%	3652.7	7.65%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e-3	-7.490e+00	0.0156	188.0	21.94%	8366.0	17.53%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e-3	-7.444e+00	0.0156	97.0	11.32%	3860.4	8.09%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e-3	-7.284e+00	0.0167	117.0	13.65%	4846.9	10.16%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e-3	-7.139e+00	0.0181	79.0	9.22%	3044.9	6.38%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e-2	-6.823e+00	0.0233	44.0	5.13%	1486.6	3.12%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e-2	-6.588e+00	0.0279	16.0	1.87%	370.2	0.78%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e-2	-6.215e+00	0.0383	44.0	5.13%	1535.5	3.22%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e-2	-5.828e+00	0.0536	12.0	1.40%	258.5	0.54%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e-2	-5.451e+00	0.0744	51.0	5.95%	1922.9	4.03%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e-2	-5.201e+00	0.0912	44.0	5.13%	1626.2	3.41%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e-2	-5.176e+00	0.0912	89.0	10.39%	3773.3	7.91%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e-2	-5.105e+00	0.0920	17.0	1.98%	471.8	0.99%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e-1	-4.526e+00	0.1576	178.0	20.77%	8431.7	17.67%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e-1	-4.165e+00	0.2174	74.0	8.63%	3187.6	6.68%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e-1	-3.959e+00	0.2571	20.0	2.33%	663.3	1.39%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e-1	-3.951e+00	0.2571	42.0	4.90%	1665.6	3.49%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e-1	-3.863e+00	0.2638	20.0	2.33%	670.3	1.40%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e-1	-3.810e+00	0.2688	7.0	0.82%	153.8	0.32%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e-1	-3.807e+00	0.2688	28.0	3.27%	1030.3	2.16%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e-1	-3.778e+00	0.2688	9.0	1.05%	226.4	0.47%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e-1	-3.760e+00	0.2688	27.0	3.15%	989.2	2.07%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e-1	-3.758e+00	0.2688	30.0	3.50%	1126.6	2.36%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e-1	-3.443e+00	0.3326	3.0	0.35%	38.5	0.08%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e-1	-3.314e+00	0.3677	33.0	3.85%	1313.3	2.75%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e-1	-3.311e+00	0.3677	22.0	2.57%	803.2	1.68%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e-1	-3.279e+00	0.3677	25.0	2.92%	943.7	1.98%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e-1	-3.146e+00	0.4015	52.0	6.07%	2258.6	4.73%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e-1	-3.114e+00	0.4043	12.0	1.40%	379.9	0.80%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e-1	-3.020e+00	0.4333	21.0	2.45%	784.7	1.64%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e-1	-2.984e+00	0.4385	133.0	15.52%	6453.1	13.52%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e-1	-2.949e+00	0.4434	73.0	8.52%	3349.2	7.02%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e-1	-2.843e+00	0.4821	30.0	3.50%	1226.9	2.57%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e-1	-2.751e+00	0.5168	193.0	22.52%	9712.4	20.35%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e-1	-2.736e+00	0.5168	32.0	3.73%	1336.4	2.80%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e-1	-2.702e+00	0.5197	22.0	2.57%	862.4	1.81%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e-1	-2.700e+00	0.5197	11.0	1.28%	363.6	0.76%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e-1	-2.590e+00	0.5572	24.0	2.80%	969.6	2.03%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e-1	-2.559e+00	0.5634	34.0	3.97%	1459.0	3.06%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e-1	-2.525e+00	0.5714	27.0	3.15%	1121.8	2.35%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e-1	-2.519e+00	0.5714	17.0	1.98%	647.8	1.36%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e-1	-2.517e+00	0.5714	16.0	1.87%	601.5	1.26%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e-1	-2.502e+00	0.5714	114.0	13.30%	5584.6	11.70%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e-1	-2.317e+00	0.6524	3.0	0.35%	61.1	0.13%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e-1	-2.316e+00	0.6524	5.0	0.58%	135.7	0.28%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e-1	-2.309e+00	0.6524	4.0	0.47%	97.0	0.20%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-2.281e+00	0.6524	18.0	2.10%	718.6	1.51%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e0	-2.237e+00	0.6589	22.0	2.57%	915.5	1.92%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e0	-2.186e+00	0.6815	9.0	1.05%	311.7	0.65%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-2.186e+00	0.6815	35.0	4.08%	1565.7	3.28%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-2.185e+00	0.6815	24.0	2.80%	1019.7	2.14%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e0	-2.158e+00	0.6815	9.0	1.05%	313.1	0.66%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e0	-2.148e+00	0.6815	11.0	1.28%	404.9	0.85%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e0	-2.142e+00	0.6815	29.0	3.38%	1273.0	2.67%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	-2.141e+00	0.6815	96.0	11.20%	4736.1	9.93%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e0	-2.088e+00	0.6815	34.0	3.97%	1531.9	3.21%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e0	-2.032e+00	0.7018	187.0	21.82%	9649.9	20.22%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e0	-2.021e+00	0.7018	49.0	5.72%	2309.4	4.84%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e0	-2.011e+00	0.7018	1.0	0.12%	8.5	0.02%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	-1.987e+00	0.7031	14.0	1.63%	559.7	1.17%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-1.955e+00	0.7159	31.0	3.62%	1402.3	2.94%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e0	-1.952e+00	0.7159	30.0	3.50%	1352.7	2.83%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e0	-1.926e+00	0.7165	89.0	10.39%	4428.1	9.28%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e0	-1.912e+00	0.7171	55.0	6.42%	2644.3	5.54%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-1.908e+00	0.7171	12.0	1.40%	472.9	0.99%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e0	-1.897e+00	0.7171	9.0	1.05%	333.9	0.70%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e0	-1.888e+00	0.7171	4.0	0.47%	114.3	0.24%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-1.881e+00	0.7171	20.0	2.33%	863.1	1.81%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-1.877e+00	0.7171	10.0	1.17%	381.5	0.80%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e0	-1.848e+00	0.7171	25.0	2.92%	1117.5	2.34%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e0	-1.826e+00	0.7171	23.0	2.68%	1020.8	2.14%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-1.824e+00	0.7171	97.0	11.32%	4885.4	10.24%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e0	-1.822e+00	0.7171	25.0	2.92%	1121.0	2.35%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e0	-1.801e+00	0.7171	61.0	7.12%	2985.4	6.26%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e0	-1.780e+00	0.7171	78.0	9.10%	3888.9	8.15%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e0	-1.777e+00	0.7171	30.0	3.50%	1382.9	2.90%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e0	-1.773e+00	0.7171	96.0	11.20%	4848.6	10.16%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e0	-1.744e+00	0.7171	68.0	7.93%	3369.9	7.06%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-1.729e+00	0.7177	25.0	2.92%	1136.1	2.38%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-1.711e+00	0.7228	21.0	2.45%	937.5	1.96%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	-1.672e+00	0.7431	6.0	0.70%	213.8	0.45%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e0	-1.669e+00	0.7431	27.0	3.15%	1248.9	2.62%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e0	-1.635e+00	0.7548	30.0	3.50%	1408.6	2.95%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e0	-1.609e+00	0.7663	52.0	6.07%	2561.7	5.37%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e0	-1.607e+00	0.7663	117.0	13.65%	6034.1	12.65%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e0	-1.520e+00	0.8207	21.0	2.45%	967.4	2.03%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-1.459e+00	0.8632	6.0	0.70%	229.4	0.48%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e0	-1.459e+00	0.8632	37.0	4.32%	1809.7	3.79%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e0	-1.389e+00	0.9079	36.0	4.20%	1773.2	3.72%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	-1.379e+00	0.9079	22.0	2.57%	1043.5	2.19%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-1.364e+00	0.9119	66.0	7.70%	3377.5	7.08%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e0	-1.356e+00	0.9119	10.0	1.17%	434.3	0.91%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e0	-1.340e+00	0.9161	34.0	3.97%	1679.3	3.52%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-1.335e+00	0.9161	29.0	3.38%	1417.8	2.97%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-1.327e+00	0.9161	14.0	1.63%	640.1	1.34%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e0	-1.299e+00	0.9280	124.0	14.47%	6542.2	13.71%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e0	-1.295e+00	0.9280	6.0	0.70%	243.9	0.51%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-1.285e+00	0.9280	4.0	0.47%	148.7	0.31%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-1.215e+00	0.9815	178.0	20.77%	9539.4	19.99%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e0	-1.198e+00	0.9897	1.0	0.12%	20.4	0.04%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-1.179e+00	0.9996	36.0	4.20%	1826.9	3.83%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-1.171e+00	0.9996	7.0	0.82%	305.3	0.64%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	-1.163e+00	0.9996	5.0	0.58%	206.7	0.43%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e0	-1.147e+00	1.0000	20.0	2.33%	983.7	2.06%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e0	-1.136e+00	1.0000	33.0	3.85%	1677.4	3.52%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	-1.119e+00	1.0000	1.0	0.12%	23.0	0.05%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e0	-1.117e+00	1.0000	31.0	3.62%	1575.6	3.30%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e0	-1.114e+00	1.0000	40.0	4.67%	2059.9	4.32%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-1.109e+00	1.0000	8.0	0.93%	363.5	0.76%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-1.096e+00	1.0000	12.0	1.40%	572.8	1.20%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e0	-1.093e+00	1.0000	24.0	2.80%	1207.6	2.53%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e0	-1.068e+00	1.0000	9.0	1.05%	420.0	0.88%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	-1.062e+00	1.0000	8.0	0.93%	369.6	0.77%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e0	-1.059e+00	1.0000	89.0	10.39%	4742.3	9.94%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e0	-1.051e+00	1.0000	13.0	1.52%	632.4	1.33%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e0	-1.046e+00	1.0000	43.0	5.02%	2243.0	4.70%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e0	-1.035e+00	1.0000	30.0	3.50%	1543.9	3.24%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e0	-1.029e+00	1.0000	28.0	3.27%	1437.1	3.01%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e0	-1.027e+00	1.0000	2.0	0.23%	70.8	0.15%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e0	-1.022e+00	1.0000	13.0	1.52%	637.2	1.34%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e0	-1.017e+00	1.0000	33.0	3.85%	1710.3	3.58%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	-1.017e+00	1.0000	1.0	0.12%	25.9	0.05%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	-1.017e+00	1.0000	1.0	0.12%	25.5	0.05%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-1.011e+00	1.0000	13.0	1.52%	639.6	1.34%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-1.002e+00	1.0000	6.0	0.70%	273.6	0.57%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e0	-9.912e-01	1.0000	9.0	1.05%	431.8	0.90%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e0	-9.807e-01	1.0000	27.0	3.15%	1396.6	2.93%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e0	-9.639e-01	1.0000	30.0	3.50%	1563.9	3.28%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e0	-9.603e-01	1.0000	6.0	0.70%	278.4	0.58%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	-9.584e-01	1.0000	2.0	0.23%	74.7	0.16%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-9.488e-01	1.0000	35.0	4.08%	1840.0	3.86%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e0	-9.421e-01	1.0000	2.0	0.23%	75.5	0.16%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-9.332e-01	1.0000	10.0	1.17%	493.5	1.03%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e0	-9.318e-01	1.0000	29.0	3.38%	1518.8	3.18%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e0	-9.225e-01	1.0000	23.0	2.68%	1195.9	2.51%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e0	-9.083e-01	1.0000	24.0	2.80%	1253.0	2.63%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	-8.887e-01	1.0000	6.0	0.70%	287.5	0.60%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-8.882e-01	1.0000	20.0	2.33%	1041.1	2.18%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e0	-8.633e-01	1.0000	101.0	11.79%	5500.3	11.53%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e0	-8.520e-01	1.0000	29.0	3.38%	1542.5	3.23%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-8.355e-01	1.0000	30.0	3.50%	1602.6	3.36%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e0	-8.319e-01	1.0000	16.0	1.87%	838.0	1.76%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e0	-8.195e-01	1.0000	36.0	4.20%	1937.8	4.06%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e0	-7.968e-01	1.0000	34.0	3.97%	1835.1	3.85%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-7.959e-01	1.0000	7.0	0.82%	354.8	0.74%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	-7.887e-01	1.0000	24.0	2.80%	1287.3	2.70%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	-7.865e-01	1.0000	3.0	0.35%	139.7	0.29%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	-7.865e-01	1.0000	3.0	0.35%	139.7	0.29%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e0	-7.826e-01	1.0000	26.0	3.03%	1399.6	2.93%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e0	-7.576e-01	1.0000	8.0	0.93%	415.0	0.87%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e0	-7.558e-01	1.0000	5.0	0.58%	251.8	0.53%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-7.512e-01	1.0000	4.0	0.47%	197.7	0.41%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e0	-7.416e-01	1.0000	19.0	2.22%	1025.7	2.15%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e0	-7.289e-01	1.0000	25.0	2.92%	1361.5	2.85%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-6.909e-01	1.0000	15.0	1.75%	817.9	1.71%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	-6.514e-01	1.0000	1.0	0.12%	41.5	0.09%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e0	-6.438e-01	1.0000	6.0	0.70%	324.5	0.68%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e0	-6.406e-01	1.0000	3.0	0.35%	155.8	0.33%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-6.373e-01	1.0000	17.0	1.98%	944.2	1.98%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	-6.326e-01	1.0000	6.0	0.70%	326.4	0.68%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e0	-6.230e-01	1.0000	5.0	0.58%	271.6	0.57%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e0	-6.173e-01	1.0000	4.0	0.47%	215.8	0.45%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e0	-6.051e-01	1.0000	5.0	0.58%	274.9	0.58%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e0	-6.044e-01	1.0000	22.0	2.57%	1236.5	2.59%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e0	-6.009e-01	1.0000	52.0	6.07%	2923.7	6.13%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-6.007e-01	1.0000	11.0	1.28%	616.4	1.29%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e0	-5.993e-01	1.0000	5.0	0.58%	275.3	0.58%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e0	-5.846e-01	1.0000	42.0	4.90%	2370.6	4.97%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	-5.754e-01	1.0000	2.0	0.23%	105.5	0.22%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	-5.712e-01	1.0000	3.0	0.35%	164.6	0.34%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e0	-5.500e-01	1.0000	17.0	1.98%	972.4	2.04%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e0	-5.484e-01	1.0000	1.0	0.12%	48.3	0.10%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e0	-5.480e-01	1.0000	11.0	1.28%	630.7	1.32%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e0	-5.437e-01	1.0000	67.0	7.82%	3800.9	7.97%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e0	-5.316e-01	1.0000	2.0	0.23%	110.4	0.23%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e0	-5.254e-01	1.0000	9.0	1.05%	521.1	1.09%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e0	-5.226e-01	1.0000	3.0	0.35%	171.3	0.36%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-5.160e-01	1.0000	3.0	0.35%	172.9	0.36%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e0	-5.085e-01	1.0000	28.0	3.27%	1615.0	3.38%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e0	-5.077e-01	1.0000	5.0	0.58%	292.1	0.61%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-4.958e-01	1.0000	12.0	1.40%	703.9	1.48%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e0	-4.846e-01	1.0000	66.0	7.70%	3784.5	7.93%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e0	-4.762e-01	1.0000	55.0	6.42%	3167.6	6.64%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e0	-4.593e-01	1.0000	24.0	2.80%	1409.2	2.95%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e0	-4.546e-01	1.0000	2.0	0.23%	120.8	0.25%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e0	-4.451e-01	1.0000	17.0	1.98%	1011.1	2.12%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e0	-4.402e-01	1.0000	17.0	1.98%	1013.9	2.12%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	-4.266e-01	1.0000	3.0	0.35%	187.1	0.39%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-4.251e-01	1.0000	5.0	0.58%	310.2	0.65%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e0	-4.244e-01	1.0000	19.0	2.22%	1136.6	2.38%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e0	-4.178e-01	1.0000	25.0	2.92%	1487.1	3.12%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-4.158e-01	1.0000	167.0	19.49%	9544.6	20.00%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e0	-4.142e-01	1.0000	2.0	0.23%	126.1	0.26%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-4.114e-01	1.0000	4.0	0.47%	252.6	0.53%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e0	-4.003e-01	1.0000	13.0	1.52%	795.9	1.67%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e0	-3.904e-01	1.0000	14.0	1.63%	858.4	1.80%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	-3.900e-01	1.0000	8.0	0.93%	501.4	1.05%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-3.854e-01	1.0000	16.0	1.87%	978.4	2.05%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e0	-3.849e-01	1.0000	5.0	0.58%	320.3	0.67%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e0	-3.841e-01	1.0000	39.0	4.55%	2315.1	4.85%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e0	-3.834e-01	1.0000	2.0	0.23%	131.8	0.28%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-3.815e-01	1.0000	45.0	5.25%	2662.3	5.58%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e0	-3.746e-01	1.0000	8.0	0.93%	506.8	1.06%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-3.709e-01	1.0000	88.0	10.27%	5128.4	10.75%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-3.693e-01	1.0000	7.0	0.82%	447.4	0.94%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e0	-3.611e-01	1.0000	20.0	2.33%	1225.5	2.57%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e0	-3.496e-01	1.0000	2.0	0.23%	137.7	0.29%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e0	-3.448e-01	1.0000	5.0	0.58%	331.4	0.69%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-3.439e-01	1.0000	3.0	0.35%	204.8	0.43%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-3.428e-01	1.0000	8.0	0.93%	517.2	1.08%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e0	-3.372e-01	1.0000	56.0	6.53%	3330.8	6.98%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e0	-3.360e-01	1.0000	7.0	0.82%	458.3	0.96%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	-3.343e-01	1.0000	1.0	0.12%	70.8	0.15%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e0	-3.331e-01	1.0000	45.0	5.25%	2699.7	5.66%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e0	-3.162e-01	1.0000	7.0	0.82%	465.3	0.98%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e0	-3.142e-01	1.0000	20.0	2.33%	1251.3	2.62%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e0	-3.129e-01	1.0000	28.0	3.27%	1724.1	3.61%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	-3.061e-01	1.0000	41.0	4.78%	2489.7	5.22%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-3.054e-01	1.0000	18.0	2.10%	1137.5	2.38%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e0	-3.008e-01	1.0000	1.0	0.12%	75.7	0.16%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e0	-2.985e-01	1.0000	35.0	4.08%	2145.5	4.50%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e0	-2.932e-01	1.0000	11.0	1.28%	721.9	1.51%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	-2.898e-01	1.0000	7.0	0.82%	475.6	1.00%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e0	-2.867e-01	1.0000	2.0	0.23%	150.7	0.32%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e0	-2.862e-01	1.0000	8.0	0.93%	539.8	1.13%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-2.781e-01	1.0000	2.0	0.23%	152.6	0.32%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	-2.722e-01	1.0000	13.0	1.52%	854.2	1.79%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e0	-2.710e-01	1.0000	51.0	5.95%	3103.6	6.50%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e0	-2.709e-01	1.0000	20.0	2.33%	1278.7	2.68%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e0	-2.633e-01	1.0000	30.0	3.50%	1879.4	3.94%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e0	-2.630e-01	1.0000	7.0	0.82%	486.3	1.02%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e0	-2.596e-01	1.0000	16.0	1.87%	1044.8	2.19%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e0	-2.516e-01	1.0000	10.0	1.17%	680.5	1.43%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e0	-2.464e-01	1.0000	52.0	6.07%	3187.5	6.68%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e0	-2.334e-01	1.0000	21.0	2.45%	1365.6	2.86%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-2.319e-01	1.0000	2.0	0.23%	164.7	0.35%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)	NNAYTTCCTGHN	1e0	-2.266e-01	1.0000	32.0	3.73%	2030.3	4.25%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-2.259e-01	1.0000	10.0	1.17%	695.0	1.46%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	-2.161e-01	1.0000	72.0	8.40%	4389.7	9.20%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e0	-2.148e-01	1.0000	20.0	2.33%	1319.9	2.77%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e0	-2.129e-01	1.0000	15.0	1.75%	1014.3	2.13%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e0	-2.123e-01	1.0000	1.0	0.12%	93.0	0.19%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e0	-2.066e-01	1.0000	30.0	3.50%	1930.7	4.05%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e0	-2.043e-01	1.0000	8.0	0.93%	579.7	1.21%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e0	-2.040e-01	1.0000	1.0	0.12%	94.1	0.20%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-1.978e-01	1.0000	70.0	8.17%	4299.9	9.01%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	-1.960e-01	1.0000	1.0	0.12%	96.8	0.20%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-1.926e-01	1.0000	74.0	8.63%	4540.8	9.52%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	-1.922e-01	1.0000	1.0	0.12%	97.8	0.21%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e0	-1.859e-01	1.0000	10.0	1.17%	719.7	1.51%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-1.747e-01	1.0000	28.0	3.27%	1843.3	3.86%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e0	-1.716e-01	1.0000	83.0	9.68%	5099.2	10.69%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e0	-1.708e-01	1.0000	6.0	0.70%	468.0	0.98%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e0	-1.674e-01	1.0000	1.0	0.12%	104.6	0.22%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-1.658e-01	1.0000	6.0	0.70%	470.5	0.99%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e0	-1.612e-01	1.0000	7.0	0.82%	541.0	1.13%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e0	-1.608e-01	1.0000	65.0	7.58%	4065.7	8.52%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-1.589e-01	1.0000	2.0	0.23%	189.9	0.40%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	-1.567e-01	1.0000	7.0	0.82%	543.2	1.14%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-1.536e-01	1.0000	12.0	1.40%	872.6	1.83%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e0	-1.494e-01	1.0000	86.0	10.04%	5316.1	11.14%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-1.480e-01	1.0000	35.0	4.08%	2300.4	4.82%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	-1.461e-01	1.0000	1.0	0.12%	111.7	0.23%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-1.388e-01	1.0000	7.0	0.82%	556.9	1.17%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e0	-1.370e-01	1.0000	19.0	2.22%	1332.4	2.79%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-1.367e-01	1.0000	2.0	0.23%	199.5	0.42%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-1.318e-01	1.0000	15.0	1.75%	1085.3	2.27%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e0	-1.302e-01	1.0000	43.0	5.02%	2810.8	5.89%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e0	-1.282e-01	1.0000	8.0	0.93%	632.7	1.33%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e0	-1.267e-01	1.0000	2.0	0.23%	204.6	0.43%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-1.259e-01	1.0000	47.0	5.48%	3058.8	6.41%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	-1.229e-01	1.0000	6.0	0.70%	500.9	1.05%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-1.144e-01	1.0000	44.0	5.13%	2899.3	6.08%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e0	-1.129e-01	1.0000	8.0	0.93%	646.5	1.35%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-1.066e-01	1.0000	5.0	0.58%	443.4	0.93%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e0	-1.066e-01	1.0000	5.0	0.58%	443.4	0.93%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e0	-1.054e-01	1.0000	1.0	0.12%	128.3	0.27%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	-1.045e-01	1.0000	14.0	1.63%	1053.4	2.21%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e0	-1.038e-01	1.0000	48.0	5.60%	3162.1	6.63%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e0	-9.999e-02	1.0000	15.0	1.75%	1124.3	2.36%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e0	-9.715e-02	1.0000	4.0	0.47%	378.1	0.79%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e0	-8.982e-02	1.0000	48.0	5.60%	3194.8	6.70%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e0	-8.859e-02	1.0000	10.0	1.17%	809.2	1.70%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e0	-8.115e-02	1.0000	4.0	0.47%	393.5	0.82%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-8.056e-02	1.0000	30.0	3.50%	2110.4	4.42%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e0	-7.920e-02	1.0000	14.0	1.63%	1090.9	2.29%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e0	-7.605e-02	1.0000	19.0	2.22%	1422.1	2.98%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	-7.361e-02	1.0000	8.0	0.93%	692.6	1.45%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e0	-7.266e-02	1.0000	38.0	4.43%	2626.9	5.50%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e0	-7.194e-02	1.0000	26.0	3.03%	1879.0	3.94%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-7.019e-02	1.0000	8.0	0.93%	697.0	1.46%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e0	-6.910e-02	1.0000	11.0	1.28%	906.8	1.90%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e0	-6.729e-02	1.0000	12.0	1.40%	977.8	2.05%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-6.598e-02	1.0000	3.0	0.35%	331.9	0.70%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-6.431e-02	1.0000	13.0	1.52%	1050.4	2.20%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e0	-5.845e-02	1.0000	51.0	5.95%	3469.7	7.27%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-5.841e-02	1.0000	4.0	0.47%	420.4	0.88%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-5.782e-02	1.0000	65.0	7.58%	4322.4	9.06%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-4.772e-02	1.0000	3.0	0.35%	355.4	0.74%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-4.738e-02	1.0000	117.0	13.65%	7471.9	15.66%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e0	-4.476e-02	1.0000	32.0	3.73%	2338.6	4.90%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e0	-4.456e-02	1.0000	18.0	2.10%	1432.8	3.00%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-3.940e-02	1.0000	100.0	11.67%	6514.5	13.65%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-3.749e-02	1.0000	2.0	0.23%	284.7	0.60%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e0	-3.631e-02	1.0000	38.0	4.43%	2754.2	5.77%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e0	-3.037e-02	1.0000	12.0	1.40%	1070.3	2.24%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e0	-2.888e-02	1.0000	10.0	1.17%	933.2	1.96%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e0	-2.722e-02	1.0000	1.0	0.12%	201.5	0.42%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-2.672e-02	1.0000	1.0	0.12%	202.9	0.43%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-2.599e-02	1.0000	5.0	0.58%	566.0	1.19%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e0	-2.128e-02	1.0000	4.0	0.47%	500.6	1.05%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-1.915e-02	1.0000	3.0	0.35%	421.7	0.88%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e0	-1.842e-02	1.0000	8.0	0.93%	830.3	1.74%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e0	-1.835e-02	1.0000	3.0	0.35%	424.6	0.89%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e0	-1.784e-02	1.0000	51.0	5.95%	3701.8	7.76%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-1.721e-02	1.0000	9.0	1.05%	912.4	1.91%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e0	-1.710e-02	1.0000	3.0	0.35%	429.7	0.90%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e0	-1.524e-02	1.0000	45.0	5.25%	3349.3	7.02%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-1.501e-02	1.0000	36.0	4.20%	2773.1	5.81%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-1.259e-02	1.0000	16.0	1.87%	1453.2	3.05%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e0	-1.221e-02	1.0000	24.0	2.80%	2009.1	4.21%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-1.125e-02	1.0000	6.0	0.70%	717.0	1.50%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-1.120e-02	1.0000	35.0	4.08%	2753.9	5.77%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-8.510e-03	1.0000	51.0	5.95%	3831.1	8.03%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e0	-8.445e-03	1.0000	55.0	6.42%	4087.0	8.56%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e0	-8.294e-03	1.0000	12.0	1.40%	1209.3	2.53%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e0	-7.036e-03	1.0000	6.0	0.70%	756.2	1.58%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-7.002e-03	1.0000	48.0	5.60%	3671.9	7.69%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e0	-6.805e-03	1.0000	2.0	0.23%	394.0	0.83%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e0	-4.877e-03	1.0000	79.0	9.22%	5695.9	11.94%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-3.753e-03	1.0000	50.0	5.83%	3900.2	8.17%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-3.582e-03	1.0000	26.0	3.03%	2304.0	4.83%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-3.183e-03	1.0000	7.0	0.82%	905.0	1.90%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e0	-5.000e-04	1.0000	54.0	6.30%	4462.3	9.35%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	0.000e+00	1.0000	0.0	0.00%	48.5	0.10%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	0.000e+00	1.0000	0.0	0.00%	76.7	0.16%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	0.000e+00	1.0000	0.0	0.00%	70.9	0.15%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e0	0.000e+00	1.0000	0.0	0.00%	158.8	0.33%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	0.000e+00	1.0000	0.0	0.00%	166.0	0.35%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	0.000e+00	1.0000	0.0	0.00%	119.5	0.25%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e0	0.000e+00	1.0000	0.0	0.00%	18.4	0.04%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	0.000e+00	1.0000	0.0	0.00%	21.9	0.05%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	38.9	0.08%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e0	0.000e+00	1.0000	0.0	0.00%	19.4	0.04%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e0	0.000e+00	1.0000	0.0	0.00%	169.7	0.36%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e0	0.000e+00	1.0000	0.0	0.00%	108.7	0.23%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e0	0.000e+00	1.0000	0.0	0.00%	9.4	0.02%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e0	0.000e+00	1.0000	0.0	0.00%	229.3	0.48%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e0	0.000e+00	1.0000	0.0	0.00%	2.0	0.00%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e0	0.000e+00	1.0000	0.0	0.00%	88.5	0.19%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e0	0.000e+00	1.0000	0.0	0.00%	33.3	0.07%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e0	0.000e+00	1.0000	0.0	0.00%	7.8	0.02%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e0	0.000e+00	1.0000	0.0	0.00%	145.8	0.31%