Information for 6-CCATTWGTSCYCW (Motif 2)

A T G C A G T C T C G A A C G T A C G T C G A T A C T G A C G T A T G C A G T C A G C T A G T C C G A T
Reverse Opposite:
C G T A A C T G C T G A A C T G A T C G C G T A G T A C C G T A C G T A C G T A A C G T A C T G A T C G
p-value:1e-11
log p-value:-2.705e+01
Information Content per bp:1.869
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.3 +/- 17.8bp
Average Position of motif in Background81.7 +/- 11.5bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Twist2/MA0633.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCATTWGTSCYCW
ACCATATGTT----
 A C G T A T G C A G T C T C G A A C G T A C G T C G A T A C T G A C G T A T G C A G T C A G C T A G T C C G A T
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCATTWGTSCYCW
-CCTTTGTTTT--
 A T G C A G T C T C G A A C G T A C G T C G A T A C T G A C G T A T G C A G T C A G C T A G T C C G A T
A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCATTWGTSCYCW
CCATATGT-----
 A T G C A G T C T C G A A C G T A C G T C G A T A C T G A C G T A T G C A G T C A G C T A G T C C G A T
T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCATTWGTSCYCW
BCMATTAG------
 A C G T A T G C A G T C T C G A A C G T A C G T C G A T A C T G A C G T A T G C A G T C A G C T A G T C C G A T
A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCATTWGTSCYCW-
WCATTTTGKCCTCYT
 A C G T A T G C A G T C T C G A A C G T A C G T C G A T A C T G A C G T A T G C A G T C A G C T A G T C C G A T A C G T
C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCATTWGTSCYCW
CCCCCTTGGGCCCC-
 A C G T A C G T A T G C A G T C T C G A A C G T A C G T C G A T A C T G A C G T A T G C A G T C A G C T A G T C C G A T
A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCATTWGTSCYCW
ACCATCTGTT----
 A C G T A T G C A G T C T C G A A C G T A C G T C G A T A C T G A C G T A T G C A G T C A G C T A G T C C G A T
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T

HOXA5/MA0158.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCATTWGTSCYCW
-AATTAGTG----
 A T G C A G T C T C G A A C G T A C G T C G A T A C T G A C G T A T G C A G T C A G C T A G T C C G A T
A C G T T G C A C G T A A G C T C G A T G C T A T A C G G A C T A C T G A C G T A C G T A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCATTWGTSCYCW
-RGTTAGTGCCCY
 A T G C A G T C T C G A A C G T A C G T C G A T A C T G A C G T A T G C A G T C A G C T A G T C C G A T
A C G T C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCATTWGTSCYCW
-YCTTTGTTCC--
 A T G C A G T C T C G A A C G T A C G T C G A T A C T G A C G T A T G C A G T C A G C T A G T C C G A T
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T