Information for 3-ARAGYAAACADHD (Motif 2)

G C T A T C G A C G T A C T A G A G T C C G T A G T C A C T G A A G T C C G T A C A T G G C A T C T G A
Reverse Opposite:
G A C T C G T A G T A C A C G T C T A G A G C T A C G T C G A T T C A G G A T C G C A T A G C T C G A T
p-value:1e-77
log p-value:-1.793e+02
Information Content per bp:1.576
Number of Target Sequences with motif262.0
Percentage of Target Sequences with motif36.34%
Number of Background Sequences with motif4483.8
Percentage of Background Sequences with motif10.15%
Average Position of motif in Targets52.2 +/- 26.6bp
Average Position of motif in Background50.7 +/- 34.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:1
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:ARAGYAAACADHD
WAAGTAAAYA---
 G C T A T C G A C G T A C T A G A G T C C G T A G T C A C T G A A G T C C G T A C A T G G C A T C T G A
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:2
Score:0.92
Offset:0
Orientation:forward strand
Alignment:ARAGYAAACADHD
AAAGTAAACA---
 G C T A T C G A C G T A C T A G A G T C C G T A G T C A C T G A A G T C C G T A C A T G G C A T C T G A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.92
Offset:0
Orientation:forward strand
Alignment:ARAGYAAACADHD
AAAGTAAACA---
 G C T A T C G A C G T A C T A G A G T C C G T A G T C A C T G A A G T C C G T A C A T G G C A T C T G A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:4
Score:0.91
Offset:1
Orientation:reverse strand
Alignment:ARAGYAAACADHD
-AAATAAACA---
 G C T A T C G A C G T A C T A G A G T C C G T A G T C A C T G A A G T C C G T A C A T G G C A T C T G A
A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:5
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-ARAGYAAACADHD-
CAAAGTAAACANNNN
 A C G T G C T A T C G A C G T A C T A G A G T C C G T A G T C A C T G A A G T C C G T A C A T G G C A T C T G A A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

FOXC2/MA0846.1/Jaspar

Match Rank:6
Score:0.89
Offset:0
Orientation:forward strand
Alignment:ARAGYAAACADHD
TAAGTAAACAAA-
 G C T A T C G A C G T A C T A G A G T C C G T A G T C A C T G A A G T C C G T A C A T G G C A T C T G A
G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A A C G T

FOXP3/MA0850.1/Jaspar

Match Rank:7
Score:0.89
Offset:3
Orientation:forward strand
Alignment:ARAGYAAACADHD
---GTAAACA---
 G C T A T C G A C G T A C T A G A G T C C G T A G T C A C T G A A G T C C G T A C A T G G C A T C T G A
A C G T A C G T A C G T C T A G G A C T C G T A C T G A T C G A A G T C C T G A A C G T A C G T A C G T

FOXD2/MA0847.1/Jaspar

Match Rank:8
Score:0.89
Offset:3
Orientation:forward strand
Alignment:ARAGYAAACADHD
---GTAAACA---
 G C T A T C G A C G T A C T A G A G T C C G T A G T C A C T G A A G T C C G T A C A T G G C A T C T G A
A C G T A C G T A C G T T C A G G A C T G T C A G T C A C G T A A G T C C T G A A C G T A C G T A C G T

FOXL1/MA0033.2/Jaspar

Match Rank:9
Score:0.88
Offset:3
Orientation:forward strand
Alignment:ARAGYAAACADHD
---GTAAACA---
 G C T A T C G A C G T A C T A G A G T C C G T A G T C A C T G A A G T C C G T A C A T G G C A T C T G A
A C G T A C G T A C G T C T A G G A C T T G C A G T C A T G C A A G T C G T C A A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.87
Offset:-5
Orientation:forward strand
Alignment:-----ARAGYAAACADHD
NNNVCTGWGYAAACASN-
 A C G T A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G T C C G T A G T C A C T G A A G T C C G T A C A T G G C A T C T G A
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A A C G T