Information for 12-CAATGTACACAAG (Motif 14)

G T A C C G T A C G T A C G A T A C T G A C G T C G T A A G T C C G T A A T G C C G T A G C T A C T A G
Reverse Opposite:
A G T C C A G T A C G T A T C G A C G T C T A G A C G T C G T A A G T C C G T A A C G T C G A T A C T G
p-value:1e-9
log p-value:-2.137e+01
Information Content per bp:1.860
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif10.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets54.6 +/- 23.8bp
Average Position of motif in Background47.9 +/- 42.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1/MA0148.3/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CAATGTACACAAG--
CAAAGTAAACANNNN
 G T A C C G T A C G T A C G A T A C T G A C G T C G T A A G T C C G T A A T G C C G T A G C T A C T A G A C G T A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

Foxa2/MA0047.2/Jaspar

Match Rank:2
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CAATGTACACAAG
NCTAAGTAAACA--
 A C G T G T A C C G T A C G T A C G A T A C T G A C G T C G T A A G T C C G T A A T G C C G T A G C T A C T A G
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:3
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CAATGTACACAAG---
AAAAAGTAAACAAAGAC
 A C G T G T A C C G T A C G T A C G A T A C T G A C G T C G T A A G T C C G T A A T G C C G T A G C T A C T A G A C G T A C G T A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

Foxk1/MA0852.1/Jaspar

Match Rank:4
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CAATGTACACAAG---
AAAATGTAAACAAACAG
 A C G T G T A C C G T A C G T A C G A T A C T G A C G T C G T A A G T C C G T A A T G C C G T A G C T A C T A G A C G T A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0018.1_Foxk1_1/Jaspar

Match Rank:5
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CAATGTACACAAG---
AAAATGTAAACAAACAG
 A C G T G T A C C G T A C G T A C G A T A C T G A C G T C G T A A G T C C G T A A T G C C G T A G C T A C T A G A C G T A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:6
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CAATGTACACAAG
-TATGTAAACANG
 G T A C C G T A C G T A C G A T A C T G A C G T C G T A A G T C C G T A A T G C C G T A G C T A C T A G
A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:7
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CAATGTACACAAG-
NCWRWGTAAACANSV
 A C G T G T A C C G T A C G T A C G A T A C T G A C G T C G T A A G T C C G T A A T G C C G T A G C T A C T A G A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

PB0019.1_Foxl1_1/Jaspar

Match Rank:8
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CAATGTACACAAG---
TAAATGTAAACAAAGGT
 A C G T G T A C C G T A C G T A C G A T A C T G A C G T C G T A A G T C C G T A A T G C C G T A G C T A C T A G A C G T A C G T A C G T
C G A T C G T A C G T A C G T A G C A T C T A G C G A T G T C A C G T A C T G A A G T C C G T A G C T A C G T A T A C G T C A G A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CAATGTACACAAG
-AAAGTAAACA--
 G T A C C G T A C G T A C G A T A C T G A C G T C G T A A G T C C G T A A T G C C G T A G C T A C T A G
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:10
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CAATGTACACAAG
-AAAGTAAACA--
 G T A C C G T A C G T A C G A T A C T G A C G T C G T A A G T C C G T A A T G C C G T A G C T A C T A G
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T