Information for 3-HDATATTTATAGKCCT (Motif 6)

G T C A C G T A C G T A C G A T C G T A C G A T A C G T A G C T G T C A A G C T C T G A A C T G A C T G A G T C G A T C G A C T
Reverse Opposite:
C T G A C T A G C T A G T G A C A G T C G A C T C T G A A C G T C T G A C G T A C G T A G C A T G C T A G C A T G C A T C A G T
p-value:1e-15
log p-value:-3.569e+01
Information Content per bp:1.643
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif3.22%
Number of Background Sequences with motif155.8
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets58.7 +/- 24.0bp
Average Position of motif in Background49.7 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13/MA0901.1/Jaspar

Match Rank:1
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:HDATATTTATAGKCCT
---NTTTTATTGG---
 G T C A C G T A C G T A C G A T C G T A C G A T A C G T A G C T G T C A A G C T C T G A A C T G A C T G A G T C G A T C G A C T
A C G T A C G T A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:2
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:HDATATTTATAGKCCT
---TTTTTATTGG---
 G T C A C G T A C G T A C G A T C G T A C G A T A C G T A G C T G T C A A G C T C T G A A C T G A C T G A G T C G A T C G A C T
A C G T A C G T A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:3
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:HDATATTTATAGKCCT
NGANTTTTATGGCTCN
 G T C A C G T A C G T A C G A T C G T A C G A T A C G T A G C T G T C A A G C T C T G A A C T G A C T G A G T C G A T C G A C T
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

PH0056.1_Hoxa9/Jaspar

Match Rank:4
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-HDATATTTATAGKCCT
ANTAATTTTATGGCCGN
 A C G T G T C A C G T A C G T A C G A T C G T A C G A T A C G T A G C T G T C A A G C T C T G A A C T G A C T G A G T C G A T C G A C T
G C T A G A C T G C A T G C T A C G T A G C A T C G A T C G A T C G A T C G T A G A C T C A T G C T A G T A G C G A T C A C T G G A C T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:5
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:HDATATTTATAGKCCT
--TGATTTATGGCC--
 G T C A C G T A C G T A C G A T C G T A C G A T A C G T A G C T G T C A A G C T C T G A A C T G A C T G A G T C G A T C G A C T
A C G T A C G T C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:6
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:HDATATTTATAGKCCT
-TCTATTTATAGN---
 G T C A C G T A C G T A C G A T C G T A C G A T A C G T A G C T G T C A A G C T C T G A A C T G A C T G A G T C G A T C G A C T
A C G T C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T A C G T A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:7
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:HDATATTTATAGKCCT
--DGWTTTATGRCN--
 G T C A C G T A C G T A C G A T C G T A C G A T A C G T A G C T G T C A A G C T C T G A A C T G A C T G A G T C G A T C G A C T
A C G T A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C A C G T A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:8
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:HDATATTTATAGKCCT
-NTGATTTATGGCC--
 G T C A C G T A C G T A C G A T C G T A C G A T A C G T A G C T G T C A A G C T C T G A A C T G A C T G A G T C G A T C G A C T
A C G T T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C A C G T A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:9
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:HDATATTTATAGKCCT-
-NAATTTTATTACCNNN
 G T C A C G T A C G T A C G A T C G T A C G A T A C G T A G C T G T C A A G C T C T G A A C T G A C T G A G T C G A T C G A C T A C G T
A C G T C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:10
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:HDATATTTATAGKCCT
----TTTAATTGCN--
 G T C A C G T A C G T A C G A T C G T A C G A T A C G T A G C T G T C A A G C T C T G A A C T G A C T G A G T C G A T C G A C T
A C G T A C G T A C G T A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C A C G T A C G T