Information for 16-AMAKAGATKGAAATCT (Motif 27)

G T C A G T A C T C G A A C G T C G T A A C T G C G T A A C G T C A G T A C T G G T C A G T C A G T C A C G A T A G T C C G A T
Reverse Opposite:
C G T A A C T G C G T A A C G T A C G T A C G T T A G C G T C A C G T A A C G T A G T C C G A T T G C A A G C T C A T G A C G T
p-value:1e-10
log p-value:-2.487e+01
Information Content per bp:1.748
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.8 +/- 24.0bp
Average Position of motif in Background63.0 +/- 4.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.79
Offset:3
Orientation:forward strand
Alignment:AMAKAGATKGAAATCT--
---NAGATWNBNATCTNN
 G T C A G T A C T C G A A C G T C G T A A C T G C G T A A C G T C A G T A C T G G T C A G T C A G T C A C G A T A G T C C G A T A C G T A C G T
A C G T A C G T A C G T A T G C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T A C T G G A T C

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.57
Offset:4
Orientation:forward strand
Alignment:AMAKAGATKGAAATCT
----ATATGCAAAT--
 G T C A G T A C T C G A A C G T C G T A A C T G C G T A A C G T C A G T A C T G G T C A G T C A G T C A C G A T A G T C C G A T
A C G T A C G T A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:3
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AMAKAGATKGAAATCT-
----ATATGCAAATNNN
 G T C A G T A C T C G A A C G T C G T A A C T G C G T A A C G T C A G T A C T G G T C A G T C A G T C A C G A T A G T C C G A T A C G T
A C G T A C G T A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AMAKAGATKGAAATCT
----TTATGCAAAT--
 G T C A G T A C T C G A A C G T C G T A A C T G C G T A A C G T C A G T A C T G G T C A G T C A G T C A C G A T A G T C C G A T
A C G T A C G T A C G T A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:5
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AMAKAGATKGAAATCT
-----NATTCAAAT--
 G T C A G T A C T C G A A C G T C G T A A C T G C G T A A C G T C A G T A C T G G T C A G T C A G T C A C G A T A G T C C G A T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:6
Score:0.55
Offset:5
Orientation:forward strand
Alignment:AMAKAGATKGAAATCT
-----TATGCAAAT--
 G T C A G T A C T C G A A C G T C G T A A C T G C G T A A C G T C A G T A C T G G T C A G T C A G T C A C G A T A G T C C G A T
A C G T A C G T A C G T A C G T A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AMAKAGATKGAAATCT-----
----NNNCTGATATCTCNNNN
 G T C A G T A C T C G A A C G T C G T A A C T G C G T A A C G T C A G T A C T G G T C A G T C A G T C A C G A T A G T C C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.54
Offset:5
Orientation:forward strand
Alignment:AMAKAGATKGAAATCT-
-----TATGCWAATBAV
 G T C A G T A C T C G A A C G T C G T A A C T G C G T A A C G T C A G T A C T G G T C A G T C A G T C A C G A T A G T C C G A T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

Gfi1/MA0038.1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AMAKAGATKGAAATCT
-CNGTGATTTN-----
 G T C A G T A C T C G A A C G T C G T A A C T G C G T A A C G T C A G T A C T G G T C A G T C A G T C A C G A T A G T C C G A T
A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T

GATA2/MA0036.2/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AMAKAGATKGAAATCT
--NCAGATAAGAANNN
 G T C A G T A C T C G A A C G T C G T A A C T G C G T A A C G T C A G T A C T G G T C A G T C A G T C A C G A T A G T C C G A T
A C G T A C G T C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T