Information for 12-GATGGAAATGATATGA (Motif 23)

A C T G C G T A C G A T C A T G T A C G T G C A T G C A G T C A A G C T A T C G T G C A G A C T C G T A C G A T C T A G C T G A
Reverse Opposite:
G A C T G A T C G C T A G A C T C T G A A C G T T A G C C T G A C A G T A C G T A C G T A T G C G T A C G C T A G A C T G T A C
p-value:1e-11
log p-value:-2.550e+01
Information Content per bp:1.701
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.6 +/- 24.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GATGGAAATGATATGA
WATGCAAATGAG----
 A C T G C G T A C G A T C A T G T A C G T G C A T G C A G T C A A G C T A T C G T G C A G A C T C G T A C G A T C T A G C T G A
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GATGGAAATGATATGA
TATGCWAATBAV----
 A C T G C G T A C G A T C A T G T A C G T G C A T G C A G T C A A G C T A T C G T G C A G A C T C G T A C G A T C T A G C T G A
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T A C G T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GATGGAAATGATATGA
TTGTATGCAAATTAGA---
 A C G T A C G T A C G T A C T G C G T A C G A T C A T G T A C G T G C A T G C A G T C A A G C T A T C G T G C A G A C T C G T A C G A T C T A G C T G A
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T A C G T A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GATGGAAATGATATGA
TTGTATGCAAATTAGA---
 A C G T A C G T A C G T A C T G C G T A C G A T C A T G T A C G T G C A T G C A G T C A A G C T A T C G T G C A G A C T C G T A C G A T C T A G C T G A
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T A C G T A C G T

POU3F2/MA0787.1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GATGGAAATGATATGA
TTATGCAAATTA-----
 A C G T A C T G C G T A C G A T C A T G T A C G T G C A T G C A G T C A A G C T A T C G T G C A G A C T C G T A C G A T C T A G C T G A
C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A A C G T A C G T A C G T A C G T A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GATGGAAATGATATGA----
---TAAACTGATAAGAAGAT
 A C T G C G T A C G A T C A T G T A C G T G C A T G C A G T C A A G C T A T C G T G C A G A C T C G T A C G A T C T A G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

PH0144.1_Pou2f2/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GATGGAAATGATATGA
TTGTATGCAAATTAGA---
 A C G T A C G T A C G T A C T G C G T A C G A T C A T G T A C G T G C A T G C A G T C A A G C T A T C G T G C A G A C T C G T A C G A T C T A G C T G A
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A A C G T A C G T A C G T

POU1F1/MA0784.1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GATGGAAATGATATGA
AATATGCAAATTAG----
 A C G T A C G T A C T G C G T A C G A T C A T G T A C G T G C A T G C A G T C A A G C T A T C G T G C A G A C T C G T A C G A T C T A G C T G A
C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G A C G T A C G T A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GATGGAAATGATATGA
TTATGCAAATTA-----
 A C G T A C T G C G T A C G A T C A T G T A C G T G C A T G C A G T C A A G C T A T C G T G C A G A C T C G T A C G A T C T A G C T G A
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A A C G T A C G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GATGGAAATGATATGA
ATATGCAAATNNN----
 A C G T A C T G C G T A C G A T C A T G T A C G T G C A T G C A G T C A A G C T A T C G T G C A G A C T C G T A C G A T C T A G C T G A
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T A C G T A C G T