Information for 9-GGCTTCCTTCCAACTC (Motif 18)

A C T G A C T G A G T C A G C T A G C T A T G C G T A C A C G T A C G T G T A C A G T C G T C A C G T A A G T C A G C T A G T C
Reverse Opposite:
T A C G C T G A C T A G A C G T A C G T A C T G A C T G G T C A G T C A A C T G A T C G C T G A C T G A T A C G T A G C A G T C
p-value:1e-11
log p-value:-2.729e+01
Information Content per bp:1.741
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.3 +/- 15.1bp
Average Position of motif in Background57.3 +/- 21.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGCTTCCTTCCAACTC
TGGCAGNCTGCCAG---
 A C G T A C T G A C T G A G T C A G C T A G C T A T G C G T A C A C G T A C G T G T A C A G T C G T C A C G T A A G T C A G C T A G T C
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T A C G T A C G T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGCTTCCTTCCAACTC
TGTTKCCTAGCAACM-
 A C T G A C T G A G T C A G C T A G C T A T G C G T A C A C G T A C G T G T A C A G T C G T C A C G T A A G T C A G C T A G T C
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C A C G T

E2F8/MA0865.1/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GGCTTCCTTCCAACTC
--TTTCCCGCCAAA--
 A C T G A C T G A G T C A G C T A G C T A T G C G T A C A C G T A C G T G T A C A G T C G T C A C G T A A G T C A G C T A G T C
A C G T A C G T G A C T A G C T A C G T A G T C A G T C A T G C T A C G A G T C T A G C C T G A C G T A G C T A A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GGCTTCCTTCCAACTC
CTTGGCANNNTGCCAA---
 A C G T A C G T A C G T A C T G A C T G A G T C A G C T A G C T A T G C G T A C A C G T A C G T G T A C A G T C G T C A C G T A A G T C A G C T A G T C
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GGCTTCCTTCCAACTC
--TTTCCCGCCMAV--
 A C T G A C T G A G T C A G C T A G C T A T G C G T A C A C G T A C G T G T A C A G T C G T C A C G T A A G T C A G C T A G T C
A C G T A C G T C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:GGCTTCCTTCCAACTC
-------TGCCAA---
 A C T G A C T G A G T C A G C T A G C T A T G C G T A C A C G T A C G T G T A C A G T C G T C A C G T A A G T C A G C T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T

E2F7/MA0758.1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GGCTTCCTTCCAACTC
-TTTTCCCGCCAAAA-
 A C T G A C T G A G T C A G C T A G C T A T G C G T A C A C G T A C G T G T A C A G T C G T C A C G T A A G T C A G C T A G T C
A C G T C G A T C G A T A G C T A G C T A T G C A T G C A G T C T C A G A G T C A T G C C G T A C G T A G C T A C G T A A C G T

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GGCTTCCTTCCAACTC
-----GGTGCCAAGT-
 A C T G A C T G A G T C A G C T A G C T A T G C G T A C A C G T A C G T G T A C A G T C G T C A C G T A A G T C A G C T A G T C
A C G T A C G T A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GGCTTCCTTCCAACTC
TTGGCATGGTGCCA----
 A C G T A C G T A C T G A C T G A G T C A G C T A G C T A T G C G T A C A C G T A C G T G T A C A G T C G T C A C G T A A G T C A G C T A G T C
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGCTTCCTTCCAACTC
NNAYTTCCTGHN-----
 A C G T A C T G A C T G A G T C A G C T A G C T A T G C G T A C A C G T A C G T G T A C A G T C G T C A C G T A A G T C A G C T A G T C
A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T