Information for 3-TAAAAGGTTTTATTAC (Motif 8)

G A C T C G T A G T C A C G T A C G T A C T A G C T A G C G A T A C G T A C G T C G A T C G T A A G C T C G A T C T G A A T G C
Reverse Opposite:
T A C G A G C T C G T A C T G A A C G T C G T A C G T A C G T A C G T A A G T C A G T C C G A T C G A T C A G T A C G T C T G A
p-value:1e-14
log p-value:-3.235e+01
Information Content per bp:1.793
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.3 +/- 22.1bp
Average Position of motif in Background47.0 +/- 14.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA10/MA0899.1/Jaspar

Match Rank:1
Score:0.71
Offset:6
Orientation:reverse strand
Alignment:TAAAAGGTTTTATTAC-
------NTTTTATTACN
 G A C T C G T A G T C A C G T A C G T A C T A G C T A G C G A T A C G T A C G T C G A T C G T A A G C T C G A T C T G A A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:2
Score:0.69
Offset:6
Orientation:reverse strand
Alignment:TAAAAGGTTTTATTAC
------NTTTTATGAC
 G A C T C G T A G T C A C G T A C G T A C T A G C T A G C G A T A C G T A C G T C G A T C G T A A G C T C G A T C T G A A T G C
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C

CDX1/MA0878.1/Jaspar

Match Rank:3
Score:0.68
Offset:7
Orientation:reverse strand
Alignment:TAAAAGGTTTTATTAC
-------TTTTATTGC
 G A C T C G T A G T C A C G T A C G T A C T A G C T A G C G A T A C G T A C G T C G A T C G T A A G C T C G A T C T G A A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C

Hoxd9/MA0913.1/Jaspar

Match Rank:4
Score:0.68
Offset:6
Orientation:reverse strand
Alignment:TAAAAGGTTTTATTAC
------TTTTTATTGC
 G A C T C G T A G T C A C G T A C G T A C T A G C T A G C G A T A C G T A C G T C G A T C G T A A G C T C G A T C T G A A T G C
A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:5
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:TAAAAGGTTTTATTAC-
-----DGWTTTATGRCN
 G A C T C G T A G T C A C G T A C G T A C T A G C T A G C G A T A C G T A C G T C G A T C G T A A G C T C G A T C T G A A T G C A C G T
A C G T A C G T A C G T A C G T A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:6
Score:0.67
Offset:7
Orientation:reverse strand
Alignment:TAAAAGGTTTTATTAC-
-------TTTAATTGCN
 G A C T C G T A G T C A C G T A C G T A C T A G C T A G C G A T A C G T A C G T C G A T C G T A A G C T C G A T C T G A A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C

PH0013.1_Cdx2/Jaspar

Match Rank:7
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:TAAAAGGTTTTATTAC----
----NAATTTTATTACCNNN
 G A C T C G T A G T C A C G T A C G T A C T A G C T A G C G A T A C G T A C G T C G A T C G T A A G C T C G A T C T G A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

PH0046.1_Hoxa10/Jaspar

Match Rank:8
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TAAAAGGTTTTATTAC---
---TNAATTTTATTACCTN
 G A C T C G T A G T C A C G T A C G T A C T A G C T A G C G A T A C G T A C G T C G A T C G T A A G C T C G A T C T G A A T G C A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C A T G G T C A C G T A C G A T C G A T G C A T C G A T C G T A G A C T C A G T C T G A A G T C T G A C C A G T G T C A

PH0012.1_Cdx1/Jaspar

Match Rank:9
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:TAAAAGGTTTTATTAC----
----NAATTTTATTACCTNN
 G A C T C G T A G T C A C G T A C G T A C T A G C T A G C G A T A C G T A C G T C G A T C G T A A G C T C G A T C T G A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T G T C A T C G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T G A C T G C T A

CDX2/MA0465.1/Jaspar

Match Rank:10
Score:0.66
Offset:7
Orientation:reverse strand
Alignment:TAAAAGGTTTTATTAC--
-------TTTTATGGCTN
 G A C T C G T A G T C A C G T A C G T A C T A G C T A G C G A T A C G T A C G T C G A T C G T A A G C T C G A T C T G A A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T