Information for 2-TWGTSCWCAGRAAAAS (Motif 6)

A C G T C G T A C A T G C A G T A T C G A G T C C G A T A T G C C G T A C A T G C T A G G C T A G T C A C T G A C G T A A T C G
Reverse Opposite:
T A G C G C A T G A C T A C G T C G A T G A T C G T A C C G A T T A C G C G A T T C A G T A G C G T C A G T A C C G A T G T C A
p-value:1e-15
log p-value:-3.612e+01
Information Content per bp:1.574
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif4.19%
Number of Background Sequences with motif311.3
Percentage of Background Sequences with motif0.66%
Average Position of motif in Targets49.1 +/- 24.9bp
Average Position of motif in Background50.4 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat6/MA0520.1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TWGTSCWCAGRAAAAS
-ANTTCTCAGGAANNN
 A C G T C G T A C A T G C A G T A T C G A G T C C G A T A T G C C G T A C A T G C T A G G C T A G T C A C T G A C G T A A T C G
A C G T C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:TWGTSCWCAGRAAAAS
-----NACAGGAAAT-
 A C G T C G T A C A T G C A G T A T C G A G T C C G A T A T G C C G T A C A T G C T A G G C T A G T C A C T G A C G T A A T C G
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.60
Offset:5
Orientation:forward strand
Alignment:TWGTSCWCAGRAAAAS
-----NACAGGAAAT-
 A C G T C G T A C A T G C A G T A T C G A G T C C G A T A T G C C G T A C A T G C T A G G C T A G T C A C T G A C G T A A T C G
A C G T A C G T A C G T A C G T A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TWGTSCWCAGRAAAAS
TACATGTGCACATAAAA--
 A C G T A C G T A C G T A C G T C G T A C A T G C A G T A T C G A G T C C G A T A T G C C G T A C A T G C T A G G C T A G T C A C T G A C G T A A T C G
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A A C G T A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TWGTSCWCAGRAAAAS
---TTCTNMGGAA---
 A C G T C G T A C A T G C A G T A T C G A G T C C G A T A T G C C G T A C A T G C T A G G C T A G T C A C T G A C G T A A T C G
A C G T A C G T A C G T C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:6
Score:0.57
Offset:6
Orientation:forward strand
Alignment:TWGTSCWCAGRAAAAS
------ACAGGAAGTG
 A C G T C G T A C A T G C A G T A T C G A G T C C G A T A T G C C G T A C A T G C T A G G C T A G T C A C T G A C G T A A T C G
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TWGTSCWCAGRAAAAS
-ANTTCTNNAGAA---
 A C G T C G T A C A T G C A G T A T C G A G T C C G A T A T G C C G T A C A T G C T A G G C T A G T C A C T G A C G T A A T C G
A C G T C T G A A G C T A C G T A C G T A G T C G A C T G A C T C T G A C T G A C T A G C G T A C G T A A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:8
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:TWGTSCWCAGRAAAAS
--------TGGAAAA-
 A C G T C G T A C A T G C A G T A T C G A G T C C G A T A T G C C G T A C A T G C T A G G C T A G T C A C T G A C G T A A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.56
Offset:5
Orientation:forward strand
Alignment:TWGTSCWCAGRAAAAS
-----AACAGGAAGT-
 A C G T C G T A C A T G C A G T A T C G A G T C C G A T A T G C C G T A C A T G C T A G G C T A G T C A C T G A C G T A A T C G
A C G T A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TWGTSCWCAGRAAAAS
----CCYMATAAAA--
 A C G T C G T A C A T G C A G T A T C G A G T C C G A T A T G C C G T A C A T G C T A G G C T A G T C A C T G A C G T A A T C G
A C G T A C G T A C G T A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T